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Related Concept Videos

Computed Tomography01:10

Computed Tomography

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Tomography refers to imaging by sections. Computed tomography (CT) is a non-invasive imaging technique that uses computers to analyze several cross-sectional X-rays to reveal minute details about structures in the body.
The technique was invented in the 1970s and is based on the principle that as X-rays pass through the body, they are absorbed or reflected at different levels. In the technique, a patient lies on a motorized platform while a computerized axial tomography (CAT) scanner rotates...
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Related Experiment Video

Updated: Jun 5, 2025

Segmentation and Linear Measurement for Body Composition Analysis using Slice-O-Matic and Horos
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Deep Learning-Based Body Composition Analysis for Cancer Patients Using Computed Tomographic Imaging.

İlkay Yıldız Potter1, Maria Virginia Velasquez-Hammerle2,3, Ara Nazarian2,3,4

  • 1BioSensics, LLC, 57 Chapel Street, Newton, MA, 02458, USA. ilkay.yildiz@biosensics.com.

Journal of Imaging Informatics in Medicine
|December 11, 2024
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Summary

A new deep learning model accurately analyzes body composition from CT scans to detect malnutrition in cancer patients. This approach improves upon existing tools, enabling earlier diagnosis and intervention for at-risk individuals.

Keywords:
Body compositionCancerComputed tomographyDeep learningSegmentation

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Area of Science:

  • Oncology
  • Radiology
  • Artificial Intelligence

Background:

  • Malnutrition affects 30-85% of cancer patients, with current tools missing 20% of at-risk individuals.
  • Abnormal body composition, specifically loss of fat and muscle mass, is a key diagnostic criterion for malnutrition.
  • Computed tomography (CT) is the gold standard for body composition analysis and is often used in cancer care.

Purpose of the Study:

  • To develop a deep learning approach for precise body composition analysis using CT scans in cancer patients.
  • To enable early detection of malnutrition by accurately segmenting adipose tissue and skeletal muscle.

Main Methods:

  • A deep learning model, Swin UNEt TRansformers (Swin UNETR), was developed to segment adipose tissue and skeletal muscle at the L3 vertebral level.
  • The model automatically localizes the L3 vertebra before segmentation.
  • The approach utilizes a dataset of 200 abdominal/pelvic CT scans from cancer patients.

Main Results:

  • Swin UNETR achieved high segmentation accuracy with Dice scores of 0.92 for adipose tissue and 0.87 for skeletal muscle.
  • The model significantly outperformed convolutional neural network benchmarks (2D U-Net) by 2-12% in Dice scores (p<0.033).
  • Predictions showed strong agreement with ground-truth data (R² 0.7-0.93), confirming its potential for accurate body composition analysis.

Conclusions:

  • The developed deep learning method provides accurate body composition analysis from CT imaging.
  • This approach can facilitate earlier malnutrition detection in cancer patients.
  • Timely interventions can be supported through improved diagnostic capabilities.