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Updated: Jun 5, 2025

Author Spotlight: Optimizing Digital Droplet PCR Method for Accurate Adeno-Associated Viral Genome Quantification
Published on: October 11, 2024
Implementing a robust platform analytical procedure for measuring adeno-associated virus vector genome titer
Thomas W Powers1, Courtney D K Sloan1, Don Stano1
1Pfizer, Analytical Research and Development, 875 Chesterfield Pkwy. West, Chesterfield, MO 63017, USA.
A new size-exclusion chromatography method accurately measures vector genome titers for AAV gene therapies. This precise and reliable technique offers a viable alternative to PCR for manufacturing and development.
Area of Science:
- Biotechnology
- Analytical Chemistry
- Gene Therapy
Background:
- Accurate vector genome (vg) titer measurement is critical for recombinant adeno-associated virus (AAV) gene therapy development, impacting patient dosing and manufacturing control.
- Current methods like qPCR and digital PCR are common, but chromatographic techniques offer promising alternatives aligned with biotherapeutic standards.
Purpose of the Study:
- To introduce and validate a novel method for measuring vg titer using size-exclusion high-performance liquid chromatography (SE-HPLC) with UV detection.
- To demonstrate the method's precision, linearity, stability-indicating properties, and applicability as a platform technology for AAV.
Main Methods:
- Development and implementation of a SE-HPLC method with UV detection for vg titer quantification.
- Evaluation of method precision (relative standard deviation <2%), linearity across concentration ranges, and performance with varied particle content.
- Assessment of the method's stability-indicating capabilities and its ability to be bridged with existing vg titer assays like qPCR.
Main Results:
- The SE-HPLC method demonstrated excellent precision (<2% relative SD) and linearity across tested concentrations and particle variations.
- The method is stability-indicating and showed no significant bias when compared to established vg titer procedures, such as qPCR.
- The approach proved applicable across different AAV serotypes and transgenes, highlighting its potential as a platform method.
Conclusions:
- The developed SE-HPLC UV detection method provides a precise, reliable, and versatile approach for measuring vg titers in AAV gene therapy products.
- This method can be implemented even in late-stage pharmaceutical development due to its performance and bridgeability with existing techniques.
- The technology represents a significant advancement for AAV therapeutic development and manufacturing.
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