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Auxiliary identification of depression patients using interpretable machine learning models based on heart rate
Min Yang1, Huiqin Zhang1, Minglan Yu2,3
1School of Public Health, Southwest Medical University, No.1 Section 1, Xiang Lin Road, Longmatan District, Luzhou, 646000, P. R. China.
Heart rate variability (HRV) shows potential as a biomarker for depression. Machine learning models, particularly XGBoost, can use HRV data for accurate, auxiliary depression diagnosis and monitoring.
Area of Science:
- Cardiology
- Psychiatry
- Machine Learning
Background:
- Depression is a significant global health concern with high incidence and disability.
- Accurate and efficient diagnosis is crucial for timely intervention.
Purpose of the Study:
- To explore the association between heart rate variability (HRV) and depression.
- To establish and validate machine learning models for auxiliary depression diagnosis using HRV.
Main Methods:
- Utilized data from 465 outpatients, randomly split into training (70%) and test (30%) sets.
- Developed and compared four machine learning models: Logistic Regression, Support Vector Machine, Random Forest, and XGBoost.
- Evaluated model performance using ROC curves, calibration curves, and decision curve analysis, with SHAP for feature importance.
Main Results:
- The XGBoost model demonstrated superior performance with Area Under the Curve (AUC) values of 0.92 in the training set and 0.82 in the test set.
- Top predictors identified by SHAP included age, heart rate, Standard Deviation of NN intervals (SDNN), two nonlinear HRV parameters, and sex.
- The XGBoost model exhibited excellent predictive efficacy and clinical utility.
Conclusions:
- HRV is a feasible potential biomarker for depression.
- The HRV-based machine learning model serves as a quantitative auxiliary diagnostic tool for clinicians.
- This tool can enhance diagnostic accuracy and efficiency, aiding in depression monitoring and prevention.
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