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Expression of Recombinant Proteins in the Methylotrophic Yeast Pichia pastoris
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Soft sensor modeling method for Pichia pastoris fermentation process based on substructure domain transfer learning.

Bo Wang1, Jun Wei2, Le Zhang3

  • 1Key Laboratory of Agricultural Measurement and Control Technology and Equipment for Mechanical Industrial Facilities, School of Electrical and Information Engineering, Jiangsu University, Zhenjiang, 212013, China.

BMC Biotechnology
|December 19, 2024
PubMed
Summary
This summary is machine-generated.

This study introduces a novel soft sensor modeling method using substructure domain transfer to improve accuracy. The approach enhances prediction of Pichia pastoris and inulinase concentrations, outperforming traditional methods.

Keywords:
Pichia pastorisSoft sensorSubstructure domainTransfer learning

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Area of Science:

  • Biotechnology
  • Chemical Engineering
  • Data Science

Background:

  • Traditional transfer learning methods for soft sensor models often suffer from data loss and domain mismatch, reducing prediction accuracy.
  • Existing approaches struggle to perfectly align source and target domains, hindering effective model transfer.

Purpose of the Study:

  • To develop an advanced soft sensor modeling method that overcomes limitations of traditional domain-level transfer.
  • To enhance the accuracy and robustness of soft sensor models by utilizing a substructure domain transfer framework.

Main Methods:

  • Clustering source and target domains into substructure domains using Gaussian mixture models.
  • Adaptively weighting substructure domains based on inter-domain distances.
  • Employing optimal subspace domain adaptation for spatial alignment of data.
  • Utilizing least squares support vector machine for final model prediction.

Main Results:

  • The proposed method significantly reduces prediction errors for Pichia pastoris concentration (48.7% RMSE reduction) and inulinase concentration (54.9% RMSE reduction).
  • Simulation results demonstrate the effectiveness of the substructure domain transfer approach in a Pichia pastoris fermentation example.

Conclusions:

  • The developed soft sensor model accurately predicts Pichia pastoris and inulinase concentrations online across different working conditions.
  • This novel method offers superior prediction accuracy compared to traditional soft sensor modeling techniques.