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Updated: Jun 4, 2025

Monitoring Stub1-Mediated Pexophagy
Published on: May 12, 2023
PEX1G843D remains functional in peroxisome biogenesis but is rapidly degraded by the proteasome
Connor J Sheedy1,2, Soham P Chowdhury3,2, Bashir A Ali4
1Biomolecular Science and Engineering Program, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Insights
The PEX1 G843D mutation impairs peroxisome protein import by destabilizing PEX1/PEX6 assembly, leading to PEX1 degradation. Protein stabilization offers a potential therapeutic strategy for Peroxisome Biogenesis Disorders.
Area of Science:
- Cell Biology
- Molecular Genetics
- Biochemistry
Background:
- Peroxisome biogenesis and maintenance rely on the PEX1/PEX6 AAA-ATPase complex.
- Mutations in PEX1 and PEX6 cause Peroxisome Biogenesis Disorders (PBDs), with HsPEX1 G843D being the most common disease-causing mutation.
- The HsPEX1 G843D mutation impairs peroxisomal matrix protein import.
Purpose of the Study:
- To investigate the molecular mechanisms underlying the HsPEX1 G843D mutation's impact on peroxisome function.
- To explore the role of PEX1/PEX6 assembly and stability in PBD pathogenesis.
- To evaluate protein stabilization as a therapeutic approach for PEX1-related PBDs.
Main Methods:
- In vitro biochemical assays using yeast Pex1 G700D mutant to assess ATPase activity and Pex6 assembly.
- Generation and analysis of human cell lines expressing HsPEX1 G843D.
- Proteasomal degradation assays and overexpression studies.
- Analysis of PEX1's affinity for PEX6.
- Deubiquitinase fusion experiments in mammalian cells.
Main Results:
- The yeast Pex1 G700D mutant showed reduced stability and impaired Pex6 assembly but retained ATPase activity, with only minor in vivo import defects.
- Human PEX1 G843D is rapidly degraded by the proteasome, but overexpression can restore peroxisome import.
- The G843D mutation decreases PEX1's affinity for PEX6, and impaired assembly induces degradation of wild-type PEX1.
- Fusing a deubiquitinase to PEX1 G843D significantly reduced its degradation in mammalian cells.
Conclusions:
- Impaired PEX1/PEX6 assembly, rather than solely ATPase dysfunction, is a key driver of PEX1 G843D-associated PBDs.
- Proteasomal degradation of PEX1 is regulated by its assembly with PEX6.
- Stabilizing PEX1 protein, particularly the G843D mutant, presents a promising therapeutic strategy for PBDs caused by PEX1 hypomorphs.
Abstract:
The PEX1/PEX6 AAA-ATPase is required for the biogenesis and maintenance of peroxisomes. Mutations in HsPEX1 and HsPEX6 disrupt peroxisomal matrix protein import and are the leading cause of Peroxisome Biogenesis Disorders (PBDs). The most common disease-causing mutation in PEX1 is the HsPEX1G843D allele, which results in a reduction of peroxisomal protein import. Here we demonstrate that in vitro the homologous yeast mutant, ScPex1G700D, reduces the stability of Pex1's active D2 ATPase domain and impairs assembly with Pex6, but can still form an active AAA-ATPase motor. In vivo, ScPex1G700D exhibits only a slight defect in peroxisome import. We generated model human HsPEX1G843D cell lines and show that PEX1G843D is rapidly degraded by the proteasome, but that induced overexpression of PEX1G843D can restore peroxisome import. Additionally, we found that the G843D mutation reduces PEX1's affinity for PEX6, and that impaired assembly is sufficient to induce degradation of PEX1WT. Lastly, we found that fusing a deubiquitinase to PEX1G843D significantly hinders its degradation in mammalian cells. Altogether, our findings suggest a novel regulatory mechanism for PEX1/PEX6 hexamer assembly and highlight the potential of protein stabilization as a therapeutic strategy for PBDs arising from the G843D mutation and other PEX1 hypomorphs.
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