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Published on: September 25, 2019
Transformer Dil-DenseUnet: An Advanced Architecture for Stroke Segmentation.
Nesrine Jazzar1,2, Besma Mabrouk3, Ali Douik1
1Research Laboratory: Networked Objects, Control and Communication Systems, NOCCS-ENISo, National Engineering School of Sousse, University of Sousse, Soussse 4023, Tunisia.
We developed Transformer Dil-DenseUNet, an automated method for segmenting stroke lesions in MRI scans. This novel architecture achieves state-of-the-art accuracy, aiding in stroke diagnosis and treatment planning.
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Neuroscience
Background:
- Accurate segmentation of stroke lesions in MRI is crucial for patient diagnosis and treatment.
- Manual segmentation is time-consuming and prone to errors, necessitating automated solutions.
- Existing automated methods struggle with capturing complex spatial relationships and long-range dependencies.
Purpose of the Study:
- To introduce Transformer Dil-DenseUNet, a novel deep learning architecture for precise stroke lesion segmentation in MRI.
- To evaluate the performance of Transformer Dil-DenseUNet on benchmark datasets for stroke lesion segmentation.
- To demonstrate the superiority of the proposed architecture over existing state-of-the-art methods.
Main Methods:
- The Transformer Dil-DenseUNet architecture integrates DenseNet for feature extraction, dilated convolutions for expanded receptive fields, and Transformer blocks for modeling long-range dependencies.
- DenseNet utilizes dense connections to enhance feature reuse and capture fine-grained details.
- Transformer blocks employ multi-head self-attention mechanisms to address limitations of Convolutional Neural Networks (CNNs) in capturing global context.
Main Results:
- The Transformer Dil-DenseUNet model achieved a Dice coefficient of 0.80 ± 0.30 on the SISS 2015 dataset.
- The model obtained a Dice coefficient of 0.81 ± 0.33 on the ISLES 2022 dataset.
- These results surpass current state-of-the-art performance on both evaluated datasets.
Conclusions:
- The Transformer Dil-DenseUNet architecture offers a significant advancement in automated stroke lesion segmentation from MRI.
- The model's ability to integrate dense connections, dilated convolutions, and self-attention mechanisms leads to improved accuracy.
- This approach holds promise for enhancing clinical diagnosis and treatment strategies for stroke patients.
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