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Updated: May 10, 2026

Membrane Transport Processes Analyzed by a Highly Parallel Nanopore Chip System at Single Protein Resolution
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Resistive-Pulse Sensing Coupled with Fluorescence Lifetime Imaging Microscopy for Differentiation of Individual
Tanner W Young1, Sarah J Cox-Vázquez1, Ethan D Call1
1Department of Chemistry, Indiana University, Bloomington, Indiana 47405-7102, United States.
None:
Characterization of individual biological nanoparticles can be significantly improved by coupling complementary analytical methods. Here, we combine resistive-pulse sensing (RPS) with fluorescence lifetime imaging microscopy (FLIM) to differentiate liposomes at the single-particle level. RPS measures the particle volume, shape, and surface-charge density, and FLIM determines the fluorescence lifetime of the fluorophore associated with the lipid membrane. The RPS devices are fabricated in-plane on a glass substrate to facilitate coupling of RPS with FLIM measurements. For proof-of-concept, we studied liposomes containing various cholesterol concentrations with membrane-intercalated Di-8-ANEPPS, whose fluorescence lifetime is known to be sensitive to cholesterol concentrations in the membrane. RPS-FLIM revealed that increasing cholesterol concentrations in the liposome from 0% to 50% increased the fluorescence lifetimes from 2.1 ± 0.2 to 3.4 ± 0.5 ns, respectively. Moreover, RPS-FLIM discerned liposome populations with the same cholesterol concentration but labeled with dyes that have different fluorescence lifetimes (Di-8-ANEPPS and COE-S6), parsing two particle populations with statistically identical volumes, cholesterol concentration, and lipid composition. Interrogation with RPS-FLIM occurred with individual particles making a single pass through the detection region and overcomes issues with fluorescence spectral overlap that limits traditional methods. We envision RPS-FLIM as a versatile and scalable technique with the potential to differentiate biological particles at the single-particle level to simultaneously inform on particle size, surface-charge density, membrane composition, and identity.
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