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Updated: Jun 4, 2025

Identification of MyoD Interactome Using Tandem Affinity Purification Coupled to Mass Spectrometry
Published on: May 17, 2016
m6A modified pre-miR-503-5p contributes to myogenic differentiation through the activation of mTOR pathway
Yalong Su1, Kaiping Deng1, Zhipeng Liu1
1Sanya Research Institute of Nanjing Agricultural University, Nanjing Agricultural University, Sanya 572025, China; Jiangsu Livestock Embryo Engineering Laboratory, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Abstract:
The post-transcriptional regulation of epigenetic modification is a hot topic in skeletal muscle development research. Both m6A modifications and miRNAs have been well-established as crucial regulators in skeletal muscle development. However, the interacting regulatory mechanisms between m6A modifications and miRNAs in skeletal muscle development remain unclear. In this study, miRNA sequencing analysis of goat primary myoblasts (GPMs) pre- and post-differentiation revealed that miR-503-5p was upregulated during myogenic differentiation, and its precursor was identified to contain m6A modification sites. Combined analysis of RIP, qRT-PCR and mRNA stability assay showed that Ythdf2 could recognize and bind the m6A site on pre-miR-503-5p, thereby facilitating the maturation of pre-miR-503-5p in an m6A-dependent manner. Moreover, the overexpression of miR-503-5p significantly inhibits the proliferation of GPMs, promotes myogenic differentiation, and enhances mitochondrial biogenesis while activating the mTOR pathway. However, the suppression of mTOR activity can effectively counteract the accelerated myogenic differentiation induced by miR-503-5p overexpression. Collectively, our results indicate that Ythdf2-dependent m6A modification facilitates the maturation of pre-miR-503-5p, thereby promoting skeletal muscle differentiation through the activation of the mTOR pathway. These insights lay a valuable foundation for further investigation into the complexities of skeletal muscle development and the potential implications of epigenetic regulation in this process.
Insights
Ythdf2-mediated m6A modification promotes skeletal muscle development by enhancing miR-503-5p maturation. This process activates the mTOR pathway, accelerating differentiation and mitochondrial biogenesis in goat primary myoblasts.
Area of Science:
- Epigenetics and molecular biology
- Skeletal muscle physiology
Background:
- Post-transcriptional regulation is crucial for skeletal muscle development.
- N6-methyladenosine (m6A) modifications and microRNAs (miRNAs) are key regulators, but their interaction in skeletal muscle is unclear.
Purpose of the Study:
- To elucidate the interplay between m6A modification and miRNAs in goat skeletal muscle development.
- To investigate the role of miR-503-5p and its regulation by m6A in myogenic differentiation.
Main Methods:
- miRNA sequencing of goat primary myoblasts (GPMs) during differentiation.
- RNA immunoprecipitation (RIP), qRT-PCR, and mRNA stability assays.
- Overexpression studies of miR-503-5p and manipulation of the mTOR pathway.
Main Results:
- miR-503-5p was upregulated during myogenic differentiation and its precursor contained m6A sites.
- Ythdf2 recognized and bound m6A sites on pre-miR-503-5p, promoting its maturation.
- miR-503-5p overexpression inhibited GPM proliferation, promoted differentiation, enhanced mitochondrial biogenesis, and activated the mTOR pathway.
- mTOR inhibition counteracted miR-503-5p-induced differentiation.
Conclusions:
- Ythdf2-dependent m6A modification facilitates pre-miR-503-5p maturation, promoting skeletal muscle differentiation.
- The miR-503-5p/mTOR pathway is a key mechanism in skeletal muscle development.
- Findings provide a foundation for understanding epigenetic regulation in skeletal muscle development.
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