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Updated: Jun 12, 2025

Author Spotlight: Decoding DNA Repair by Extrachromosomal NHEJ Assay and HR Assays
Published on: February 2, 2024
Huntingtin interactome reveals huntingtin role in regulation of double strand break DNA damage response (DSB/DDR),
Tamara Ratovitski1, Chloe D Holland1, Robert N O'Meally2
1Division of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, 600 North Wolfe Street, CMSC 5 South, Baltimore, MD21287.
Insights
Huntington's Disease (HD) involves the huntingtin (HTT) protein interacting with DNA repair and RNA processing. This study reveals HTT's role in DNA double-strand break repair, linking it to gene regulation in HD.
Area of Science:
- Molecular Biology
- Neurogenetics
- Cellular Biology
Background:
- Huntington's Disease (HD) is a neurodegenerative disorder caused by CAG repeat expansion in the huntingtin (HTT) gene.
- The precise cellular functions of normal and mutant HTT protein and their interactions are not fully understood.
- Previous research suggests roles for DNA damage response and RNA processing in HD pathogenesis.
Purpose of the Study:
- To identify huntingtin (HTT) protein interactors under DNA damage stress.
- To elucidate the role of HTT in DNA repair and RNA processing pathways relevant to Huntington's Disease.
Main Methods:
- Utilized multiple biochemical and cellular approaches to identify HTT interacting proteins.
- Investigated HTT interactions with DNA repair kinases, RNA-binding proteins, and chromatin remodeling complexes.
- Analyzed HTT phosphorylation in response to DNA double-strand breaks (DSBs).
Main Results:
- Identified numerous HTT interactors involved in DNA repair/remodeling and RNA processing.
- Demonstrated HTT's involvement in double-strand break repair, including functional interaction with DNA-PKcs.
- Showed HTT interacts with RNA-binding proteins (TCERG1, MED15) and the BAF chromatin remodeling complex, with HTT S1181 phosphorylation regulated by DSBs.
Conclusions:
- Huntingtin (HTT) protein acts as a scaffold, integrating DNA repair and RNA processing pathways.
- HTT plays a significant role in regulating gene expression and RNA processing within the context of DNA damage response.
- These findings offer new insights into Huntington's Disease cellular mechanisms and potential therapeutic targets.
Abstract:
Huntington's Disease (HD), a progressive neurodegenerative disorder with no disease-modifying therapies, is caused by a CAG repeat expansion in the HD gene encoding polyglutamine-expanded huntingtin (HTT) protein. Mechanisms of HD cellular pathogenesis and cellular functions of the normal and mutant HTT proteins are still not completely understood. HTT protein has numerous interaction partners, and it likely provides a scaffold for assembly of multiprotein complexes many of which may be altered in HD. Previous studies have implicated DNA damage response in HD pathogenesis. Gene transcription and RNA processing has also emerged as molecular mechanisms associated with HD. Here we used multiple approaches to identify HTT interactors in the context of DNA damage stress. Our results indicate that HTT interacts with many proteins involved in the regulation of interconnected DNA repair/remodeling and RNA processing pathways. We present evidence for a role for HTT in double strand break repair mechanism. We demonstrate HTT functional interaction with a major DNA damage response kinase DNA-PKcs and association of both proteins with nuclear speckles. We show that S1181 phosphorylation of HTT is regulated by DSB, and can be carried out (at least in vitro) by DNA-PK. Furthermore, we show HTT interactions with RNA binding proteins associated with nuclear speckles, including two proteins encoded by genes at HD modifier loci, TCERG1 and MED15, and with chromatin remodeling complex BAF. These interactions of HTT may position it as an important scaffolding intermediary providing integrated regulation of gene expression and RNA processing in the context of DNA repair mechanisms.
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