Inactivation of GSK3β by Ser389 phosphorylation prevents thymocyte necroptosis and impacts Tcr repertoire diversity
Felipe Valença-Pereira1, Ryan M Sheridan2, Kent A Riemondy2
1Department of Immunology and Microbiology, University of Colorado, Anschutz Medical Campus, Aurora, CO, 80045, USA.
Abstract:
The assembly of Tcrb and Tcra genes require double negative (DN) thymocytes to undergo multiple rounds of programmed DNA double-strand breaks (DSBs), followed by their efficient repair. However, mechanisms governing cell cycle checkpoints and specific survival pathways during the repair process remain unclear. Here, we report high-resolution scRNA-seq analyses of individually sorted mouse DN3 and DN4 thymocytes, which reveals a G2M cell cycle checkpoint, in addition to the known G1 checkpoint, during Tcrb and Tcra recombination. We also show that inactivation of GSK3β by phosphorylation on Ser389 is essential for DN3/DN4 thymocytes to survive while being stalled at the G1 and G2/M checkpoints. GSK3β promotes death by necroptosis, but not by apoptosis, of DN3/DN4 thymocytes during V(D)J recombination. Failure to inactivate GSK3β in DN3 thymocytes alters the Tcrb gene repertoire primarily through Trbv segment utilization. In addition, preferential recombination of proximal V segments in Tcra depends on GSK3β inactivation. Our study identifies a unique thymocyte survival pathway, enabling them to undergo cell cycle checkpoints for DNA repair during V(D)J recombination of Tcrb and Tcra genes. Thymocyte survival during cell cycle checkpoints for V(D)J recombination DNA repair determines TCRα/β repertoire.
Insights
T cell development requires DNA repair during gene assembly. This study reveals a survival pathway involving GSK3β inactivation and cell cycle checkpoints, crucial for thymocyte survival and shaping the T cell receptor repertoire.
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- T cell receptor (TCR) gene assembly involves DNA double-strand breaks (DSBs) and repair in developing thymocytes.
- Cell cycle checkpoints and survival mechanisms during TCR gene recombination are not fully understood.
Purpose of the Study:
- To investigate cell cycle checkpoints and survival pathways in thymocytes during TCR gene (Tcrb and Tcra) V(D)J recombination.
- To elucidate the role of GSK3β in thymocyte survival and TCR repertoire formation.
Main Methods:
- High-resolution single-cell RNA sequencing (scRNA-seq) of sorted mouse DN3 and DN4 thymocytes.
- Analysis of cell cycle status and gene expression during V(D)J recombination.
Main Results:
- Identified both G1 and G2/M cell cycle checkpoints during Tcrb and Tcra gene recombination.
- Demonstrated that GSK3β inactivation (phosphorylation at Ser389) is essential for thymocyte survival at these checkpoints.
- Showed that GSK3β promotes necroptosis, not apoptosis, in thymocytes undergoing V(D)J recombination.
- Found that failure to inactivate GSK3β alters the Tcrb and Tcra gene repertoire by affecting V segment utilization.
Conclusions:
- Discovered a novel thymocyte survival pathway critical for DNA repair during V(D)J recombination.
- GSK3β inactivation is a key regulator of thymocyte survival and T cell receptor repertoire diversity.
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