Developing novel Lin28 inhibitors by computer aided drug design
Victor M Matias-Barrios1, Mariia Radaeva1, Graciella Rosellinny1
1The Vancouver Prostate Centre, Department of Urologic Sciences, University of British Columbia, 2660 Oak Street, Vancouver, BC, V6H 3Z6, Canada.
Abstract:
Lin28 is a key regulator of cancer stem cell gene network that promotes therapy-resistant tumor progression in various tumors. However, no Lin28 inhibitor has been approved to treat cancer patients, urging exploration of novel compounds as candidates to be tested for clinical trials. In this contribution, we applied computer-aided drug design (CADD) in combination with quantitative biochemical and biological assays. These efforts led to the discovery of Ln268 as a drug candidate that can block Lin28 from binding to its RNA substrates and inhibit Lin28 activities. Ln268 suppressed Lin28-mediated cancer cell proliferation and spheroid growth. Results from nuclear magnetic resonance spectroscopy confirmed that Ln268 perturbs the conformation of the zinc knuckle domain of Lin28, validating the rational drug design by CADD. The inhibitory effects of Ln268 are dependent on Lin28 protein expression in cancer cells, highlighting limited off-target effects of Ln268. Moreover, Ln268 synergizes with several chemotherapy drugs to suppress tumor cell growth. In summary, Ln268 is a promising candidate for further development to target Lin28 as a cancer therapy.
Insights
Researchers discovered Ln268, a novel compound targeting Lin28 (a key regulator in cancer stem cells), to combat therapy-resistant tumors. This drug candidate inhibits Lin28 activity and shows promise for cancer treatment development.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Lin28 is a critical regulator of cancer stem cell networks, driving therapy-resistant tumor progression.
- Existing Lin28 inhibitors lack clinical approval, necessitating the search for novel therapeutic agents.
Purpose of the Study:
- To discover and characterize novel compounds that inhibit Lin28 activity for potential cancer therapy.
- To validate a computer-aided drug design (CADD) approach for identifying Lin28 inhibitors.
Main Methods:
- Computer-aided drug design (CADD) was employed to identify potential Lin28 inhibitors.
- Quantitative biochemical and biological assays were used to assess compound efficacy.
- Nuclear magnetic resonance (NMR) spectroscopy confirmed the molecular interaction of the drug candidate with Lin28.
Main Results:
- Ln268 was identified as a potent inhibitor that blocks Lin28 binding to RNA substrates and inhibits its activity.
- Ln268 suppressed cancer cell proliferation and spheroid growth, with effects dependent on Lin28 expression.
- NMR confirmed Ln268 perturbs the Lin28 zinc knuckle domain, validating the CADD approach.
- Ln268 demonstrated synergy with conventional chemotherapy drugs.
Conclusions:
- Ln268 is a promising drug candidate for targeting Lin28 in cancer therapy.
- The study validates the use of CADD in discovering targeted cancer therapeutics.
- Ln268 exhibits specific inhibitory effects and potential for combination therapy.
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