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Updated: Jun 2, 2025

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Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
Published on: June 16, 2011
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Mutations in chikungunya virus nsP4 decrease viral fitness and sensitivity to the broad-spectrum antiviral
Peiqi Yin1, Elizabeth B Sobolik2, Nicholas A May3
1Department of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Plos Pathogens
|January 13, 2025
Summary
The antiviral 4'-fluorouridine (4'-FlU) shows promise against Chikungunya virus (CHIKV). Resistance mutations were identified but did not compromise CHIKV replication, supporting 4'-FlU
Area of Science:
- Virology
- Drug Discovery
- Infectious Diseases
Background:
- Chikungunya virus (CHIKV) causes widespread human infections, with no current approved antiviral treatments.
- The ribonucleoside analog 4 -fluorouridine (4 -FlU) effectively inhibits CHIKV replication by targeting the viral RNA-dependent RNA polymerase (nsP4).
- Previous studies demonstrated 4 -FlU's efficacy in reducing viral loads and disease signs in mouse models.
Purpose of the Study:
- To assess the potential of 4 -FlU as a Chikungunya virus antiviral.
- To identify and characterize CHIKV variants with reduced sensitivity to 4 -FlU.
Main Methods:
- Selection of CHIKV variants resistant to 4 -FlU.
- Identification of mutations in viral proteins nsP2 and nsP4.
- Assessment of 4 -FlU sensitivity, viral fitness (in vitro and in vivo), and nsP4 fidelity.
- Pathogenesis studies in mouse models using identified CHIKV variants.
Main Results:
- Two pairs of mutations in nsP2 and nsP4 conferred decreased 4 -FlU sensitivity, with nsP4 mutations Q192L and C483Y being primarily responsible.
- Resistant variants remained susceptible to higher concentrations of 4 -FlU.
- Identified mutations did not affect nsP4 fidelity or confer a viral fitness advantage.
- The nsP4-C483Y variant exhibited similar pathogenesis to wild-type CHIKV, while the nsP4-Q192L variant was attenuated in mice.
Conclusions:
- The identified resistance mutations do not fully abrogate 4 -FlU's antiviral activity.
- The study supports the potential of 4 -FlU as a viable antiviral therapeutic for Chikungunya virus infections.
- Further investigation into 4 -FlU's efficacy and resistance profile is warranted.

