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GIMAP1 interacts with TMX1 to improve lung adenocarcinoma prognosis by influencing tumor immune microenvironment
Pinglang Ruan1, Jiani Li2, Khalid A Abdelhalim3
1Department of Dermatology, Second Xiangya Hospital, Central South University, Changsha, Hunan, China; Department of Medical Microbiology, Xiangya School of Medicine, Central South University, Changsha, Hunan, China.
Abstract:
Recent studies have indicated that the GIMAP family is downregulated in lung cancer and correlates with poor prognosis, although the underlying mechanisms remain unclear. This study aimed to elucidate the mechanism behind GIMAP1 downregulation in lung cancer. Bioinformatics tools were employed to assess the correlation between the GIMAP family and various cancers. Specifically, GIMAP1 was selected for further investigation, and its role in lung adenocarcinoma was confirmed through RNA sequencing analysis, Gene Set Enrichment Analysis (GSEA) of differentially expressed genes, correlation analysis with immune cell infiltration, and assay of the GIMAP1-TMX1 interaction. Based on bioinformatics analysis and real-world cohort studies, it was found that GIMAP1 was underexpressed in lung cancer tissues but exhibited elevated expression following immunotherapy. Overexpression of GIMAP1 was shown to influence several immune signaling pathways. In patients with high GIMAP1 expression, there was a significant increase in the infiltration of CD8+ T cells, activated memory CD4+ T cells, monocytes, and M1 macrophages; conversely, infiltration by M0 macrophages, resting dendritic cells (DCs), and plasma cells was significantly reduced. In vitro experiments showed that high levels of GIMAP1 increased the percentage of Treg, NK, and NKT cells. Additionally, GIMAP1 directly interacted with TMX1 and modulated the expression of downstream immune-related genes including CMTM5, IL17F, TRAV34, and XCR1. Therefore, GIMAP1 may serve as a promising therapeutic target in lung cancer, influencing both disease initiation and progression.
Insights
The GIMAP1 gene is underexpressed in lung cancer, impacting immune cell infiltration and potentially serving as a therapeutic target. Its overexpression correlates with increased beneficial immune cells and decreased suppressive ones.
Area of Science:
- Oncology
- Immunology
- Genetics
Background:
- The GIMAP family is downregulated in lung cancer, correlating with poor prognosis.
- Mechanisms underlying GIMAP1 downregulation in lung cancer are unclear.
Purpose of the Study:
- To elucidate the mechanism of GIMAP1 downregulation in lung cancer.
- To investigate the role of GIMAP1 in lung adenocarcinoma and its interaction with immune signaling.
Main Methods:
- Bioinformatics analysis, including RNA sequencing and Gene Set Enrichment Analysis (GSEA).
- Correlation analysis with immune cell infiltration.
- In vitro experiments and assay of the GIMAP1-TMX1 interaction.
Main Results:
- GIMAP1 is underexpressed in lung cancer tissues but upregulated post-immunotherapy.
- High GIMAP1 expression increases infiltration of CD8+ T cells, monocytes, M1 macrophages, and Treg, NK, NKT cells.
- GIMAP1 interacts with TMX1, modulating downstream immune-related genes.
Conclusions:
- GIMAP1 plays a significant role in modulating the tumor immune microenvironment in lung cancer.
- GIMAP1 influences immune cell infiltration and signaling pathways.
- GIMAP1 represents a potential therapeutic target for lung cancer treatment.
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