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Updated: Jun 2, 2025

Optimized Analysis of DNA Methylation and Gene Expression from Small, Anatomically-defined Areas of the Brain
Published on: July 12, 2012
Child DNA methylation in a randomised controlled trial of a video-feedback intervention to promote positive parenting
Elizabeth C Braithwaite1, Jessica Cole2, Christopher Murgatroyd2
1Department of Psychology, Faculty of Health and Education, Manchester Metropolitan University, Manchester, United Kingdom.
Insights
Harsh parenting can affect child behavior through DNA methylation. A parenting intervention showed sex-specific changes in FKBP5 DNA methylation, but no direct link to behavior was found.
Area of Science:
- Developmental Psychology
- Epigenetics
- Behavioral Science
Background:
- Harsh parenting is a risk factor for behavioral difficulties in children.
- Parenting may influence child behavior via changes in DNA methylation.
- Understanding this link is crucial for developing targeted interventions.
Purpose of the Study:
- To investigate the hypothesis that parenting interventions are associated with child DNA methylation and behavior.
- To examine sex-specific differences in DNA methylation in response to a parenting intervention.
- To explore the association between DNA methylation and child behavior.
Main Methods:
- A randomized controlled trial comparing a video-feedback intervention (VIPP-SD) with usual care for caregivers of young children.
- DNA methylation analysis of NR3C1, FKBP5, and OXYR genes in child buccal samples.
- Assessment of child behavior using the Preschool Parental Account of Children's Symptoms (PPACS).
Main Results:
- No significant group or sex differences in DNA methylation for NR3C1 and OXYR genes.
- A significant interaction between intervention group and sex for FKBP5 DNA methylation.
- Males in the usual care group had higher methylation than females; females in the intervention group had higher methylation than males.
- FKBP5 DNA methylation was not associated with child behavior in either sex.
Conclusions:
- This study provides initial evidence from a randomized controlled trial on sex-specific DNA methylation changes in response to a parenting intervention.
- The findings highlight the potential of parenting interventions to influence epigenetic mechanisms related to stress reactivity.
- Further research is needed to understand the dynamic changes in DNA methylation over time and its causal link to child behavior.
Introduction:
A major modifiable risk factor for behavioural difficulties is harsh and insensitive parenting, and it has been hypothesised that the biological mechanism by which parenting influences child behaviour is via changes in the child's DNA methylation. We attempted to, in part, address the hypothesis that parenting is associated with child DNA methylation and, in turn, behaviour.
Methods:
Primary caregivers of young children with behavioural difficulties (children aged 12-36 months) were randomised to receive a video-feedback Intervention to promote Positive Parenting and Sensitive Discipline (VIPP-SD) (n = 151), or usual care (n = 149). Child buccal samples were collected at a 2-year post-randomisation follow up (children aged 3-5 years, VIPP-SD group n = 106, usual care group n = 117) and were assessed for DNA methylation at the NR3C1, FKBP5 and OXYR genes. Child behaviour was assessed at baseline, post-intervention and 2-years post-randomisation using the Preschool Parental Account of Children's Symptoms (PPACS). We examined group differences in DNA methylation, associations of DNA methylation with behaviour, and sex differences.
Results:
For the NR3C1 and OXYR genes, there were no group differences, sex differences, or associations of DNA methylation with child behaviour, though all non-significant findings were in the hypothesised direction. For FKBP5 DNA methylation, there was a significant interaction between group and sex, such that males in the usual care group had higher DNA methylation than females, but in the intervention group females had higher DNA methylation than males. However, FKBP5 DNA methylation was not associated with behaviour in males or females.
Discussion:
We provide the first evidence from a randomised controlled trial focused on improving parenting for sex-specific changes in child DNA methylation at a key gene involved in stress reactivity and psychopathology. This study adds to our understanding of causal mechanisms linking parenting with child behaviour, which is important for developing targeted interventions. A key limitation is that child DNA methylation was only assessed at one time point, so we were unable to assess change in DNA methylation over time. However, we demonstrate that is possible to collect and analyse DNA samples from families with young children receiving parenting interventions in the community, providing impetus for further research on this topic.
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