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Updated: Jun 1, 2025

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
CK2α-mediated phosphorylation of DUB3 promotes YAP1 stability and oncogenic functions
Lei Huang1, Yalei Wen2, Qin Guo3
1Department of General Surgery, Guangzhou Red Cross Hospital/State Key Laboratory of Bioactive Molecules and Druggability Assessment/International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Ministry of Education (MOE) of China/College of Pharmacy, Jinan University, Guangzhou, China.
Abstract:
The aberrant upregulation of Yes-associated protein 1 (YAP1) in a variety of solid cancers contributes to tumor progression and poor clinical outcomes, rendering it an appealing therapeutic target. However, effective therapies to directly target YAP1 remain challenging. In this study, we perform a high-throughput screening and identify Casein kinase II (CK2) as an uncharacterized upstream regulator of YAP1 turnover in cancer cells of ovarian cancer and several other cancer types. Pharmacological inhibition of Casein kinase II by Silmitasertib or genetic depletion of the catalytic subunit of Casein kinase II (CK2α) markedly destabilizes YAP1 and consequently suppresses its oncogenic functions in vitro and in vivo. Moreover, we reveal that DUB3 as a bona fide deubiquitinase of YAP1, which functionally links CK2 and YAP1 stability in a variety of human cancers. Mechanistically, CK2α directly phosphorylates DUB3 at Thr495, thereby facilitating DUB3-mediated deubiquitination process of YAP1. On the contrary, the loss of Thr495 phosphorylation by the phosphorylation-defective mutant DUB3 T495A, the cancer-related mutant DUB3 D496H and CK2 inhibition failed to deubiquitinate and stabilize YAP1 effectively. Notably, upregulated expressions of CK2α and DUB3 in ovarian cancer positively correlate with YAP1 overexpression. Collectively, our findings demonstrate the functional significance of the CK2α-DUB3 axis in YAP1 stabilization and YAP1-driven tumor progression, highlighting that strategies to target this axis might be of benefit in the clinical management of ovarian cancer and several other lethal cancers with aberrantly upregulated YAP1.
Insights
Casein kinase II (CK2) regulates Yes-associated protein 1 (YAP1) stability via DUB3. Inhibiting CK2 destabilizes YAP1, suppressing cancer progression, offering new therapeutic strategies for ovarian and other cancers.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Yes-associated protein 1 (YAP1) upregulation drives tumor progression and poor outcomes in various cancers.
- Targeting YAP1 is therapeutically challenging due to difficulties in direct inhibition.
- Understanding YAP1 regulation is crucial for developing effective cancer therapies.
Purpose of the Study:
- Identify novel upstream regulators of YAP1 turnover.
- Investigate the role of Casein kinase II (CK2) in YAP1 regulation.
- Elucidate the molecular mechanism linking CK2, DUB3, and YAP1 stability in cancer.
Main Methods:
- High-throughput screening to identify YAP1 regulators.
- Pharmacological inhibition (Silmitasertib) and genetic depletion (CK2α) of CK2.
- In vitro and in vivo studies to assess YAP1 destabilization and oncogenic function suppression.
- Analysis of DUB3 phosphorylation and its effect on YAP1 deubiquitination.
- Correlation analysis of CK2α, DUB3, and YAP1 expression in ovarian cancer tissues.
Main Results:
- CK2 identified as an upstream regulator of YAP1 turnover in multiple cancer types.
- CK2 inhibition (Silmitasertib or CK2α depletion) destabilizes YAP1 and suppresses its oncogenic functions.
- DUB3 identified as a deubiquitinase of YAP1, linking CK2 to YAP1 stability.
- CK2α directly phosphorylates DUB3 at Thr495, promoting YAP1 deubiquitination and stabilization.
- Phosphorylation-defective DUB3 mutants and CK2 inhibition impair YAP1 stabilization.
- Upregulated CK2α and DUB3 correlate with YAP1 overexpression in ovarian cancer.
Conclusions:
- The CK2α-DUB3 axis is critical for YAP1 stabilization and YAP1-driven tumor progression.
- Targeting the CK2α-DUB3 axis offers a promising therapeutic strategy for YAP1-driven cancers.
- This axis represents a potential therapeutic vulnerability in ovarian and other lethal cancers.
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