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A Chromatin Assay for Human Brain Tissue
Published on: March 21, 2008
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A method for HDAC activity screening in postmortem human brain. A proof-of-concept study with antipsychotics
Oihane Martínez-Peula1, Alfredo Ramos-Miguel2, Carolina Muguruza2
1Department of Pharmacology, University of the Basque Country, UPV/EHU, Leioa, Spain.
Journal of Neuroscience Methods
|January 20, 2025
Summary
We developed a new assay to measure histone deacetylase (HDAC) activity in postmortem brain samples. This method confirmed that antipsychotic drugs do not alter class I HDAC activity in schizophrenia patients.
Area of Science:
- Neuroscience
- Biochemistry
- Pharmacology
Background:
- Histone deacetylase (HDAC) activity is dysregulated in various brain disorders.
- Antipsychotic drugs (APs) are used to treat schizophrenia, but their impact on brain HDAC activity is unclear.
Purpose of the Study:
- To optimize and characterize a reliable assay for measuring HDAC activity in postmortem human brain samples.
- To investigate the effect of APs on HDAC activity in the brains of schizophrenia subjects.
Main Methods:
- Developed and validated a cost-efficient HDAC activity assay using Boc-Lys(Ac)-AMC substrate.
- Characterized assay parameters including subcellular fraction and protein concentration.
- Utilized the assay for enzyme kinetics and screening of HDAC inhibitors (HDACis).
- Assessed the effect of APs on class I HDAC activity in postmortem human brain and rat models.
Main Results:
- The optimized assay demonstrated reliability and detected class I HDAC activity, with IC50 values consistent with prior research.
- Inhibition studies confirmed the assay's ability to identify class I HDAC activity.
- No modulation of class I HDAC activity was observed in postmortem human brain samples treated with APs.
- Enzyme kinetic studies in rats treated with APs also showed no effect on class I HDAC activity.
Conclusions:
- An optimized and validated assay for measuring HDAC activity in postmortem human brain samples was successfully developed.
- Antipsychotic drugs were found to have no modulatory effect on class I HDAC activity in the studied samples.

