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Updated: May 31, 2025

Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
Published on: October 11, 2018
Elevating performance and interpretability of in silico classifiers for drug proarrhythmia risk evaluations using
Ali Ikhsanul Qauli1, Nurul Qashri Mahardika T2, Ulfa Latifa Hanum2
1Kumoh National Institute of Technology, IT convergence engineering, Gumi 39177, Republic of Korea; Universitas Airlangga, Faculty of Advanced Technology and Multidiscipline, Department of Engineering, Surabaya, Indonesia.
Improving drug proarrhythmia risk assessment requires combining multiple biomarkers. Our enhanced model uses several physiological markers for better prediction and interpretation, offering a practical alternative to single-biomarker approaches.
Area of Science:
- Computational toxicology
- Pharmacology
- Machine learning in drug safety
Background:
- In silico drug assessment systems predict proarrhythmia risk.
- Current leading systems use single biomarkers like qNet, offering interpretability.
- Advanced models use multiple biomarkers for better prediction but lack intuition.
Purpose of the Study:
- To develop a method for proarrhythmia risk assessment using multiple biomarkers.
- To maintain interpretability while enhancing predictive capabilities.
- To provide practical alternatives for drug safety evaluations.
Main Methods:
- Enhanced ordinal logistic regression (OLR) with additional physiological biomarkers.
- Introduced a general torsade metric score (TMS) for multi-biomarker interpretability.
- Employed a multi-criteria decision analysis ranking algorithm for classifier evaluation.
Main Results:
- Multi-biomarker approaches show superior performance compared to single qNet.
- Some OLR models without qNet outperform those including it.
- Individual poorly performing biomarkers can improve in combination.
Conclusions:
- The proposed method effectively utilizes multiple biomarkers for proarrhythmia risk assessment.
- The TMS provides straightforward interpretability for multi-biomarker OLR models.
- Offers practical and interpretable alternatives for drug safety evaluations.
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