Mechanisms of RCD-1 pore formation and membrane bending
Keli Ren1, James Daniel Farrell1,2,3, Yueyue Li4,5
1Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, 100190, Beijing, PR China.
Abstract:
Regulator of cell death-1 (RCD-1) governs the heteroallelic expression of RCD-1-1 and RCD-1-2, a pair of fungal gasdermin (GSDM)-like proteins, which prevent cytoplasmic mixing during allorecognition and safeguard against mycoparasitism, genome exploitation, and deleterious cytoplasmic elements (e.g., senescence plasmids) by effecting a form of cytolytic cell death. However, the underlying mechanisms by which RCD-1 acts on the cell membrane remain elusive. Here, we demonstrate that RCD-1 binds acidic lipid membranes, forms pores, and induces membrane bending. Using atomic force microscopy (AFM) and AlphaFold, we show that RCD-1-1 and RCD-1-2 form heterodimers that further self-assemble into ~14.5 nm-wide transmembrane pores (~10 heterodimers). Moreover, through AFM force spectroscopy and micropipette aspiration, we reveal that RCD-1 proteins bend membranes with low bending moduli. This combined action of pore formation and membrane deformation may constitute a conserved mechanism within the broader GSDM family.
Insights
Regulator of cell death-1 (RCD-1) proteins bind cell membranes, forming pores and inducing bending. This action, involving RCD-1-1 and RCD-1-2 heterodimers, safeguards fungal cells from threats.
Area of Science:
- Cell biology
- Molecular mechanisms of cell death
- Fungal protein interactions
Background:
- Regulator of cell death-1 (RCD-1) controls fungal cell death and prevents cytoplasmic mixing.
- RCD-1 comprises RCD-1-1 and RCD-1-2, fungal gasdermin (GSDM)-like proteins.
- The precise mechanism of RCD-1's membrane interaction was previously unknown.
Purpose of the Study:
- To elucidate the molecular mechanisms by which RCD-1 interacts with and affects cell membranes.
- To investigate the structural assembly and membrane-disrupting capabilities of RCD-1 proteins.
Main Methods:
- Atomic force microscopy (AFM) for imaging and force spectroscopy.
- AlphaFold for protein structure prediction.
- Micropipette aspiration to assess membrane mechanics.
Main Results:
- RCD-1 proteins bind to acidic lipid membranes.
- RCD-1-1 and RCD-1-2 form heterodimers that assemble into transmembrane pores (~14.5 nm width).
- RCD-1 proteins induce significant membrane bending, particularly in membranes with low bending moduli.
Conclusions:
- RCD-1 mediates cell death through pore formation and membrane deformation.
- These actions are crucial for preventing cytoplasmic mixing and protecting fungal cells.
- The pore formation and membrane bending mechanism may be conserved across the GSDM family.
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