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Updated: May 30, 2025

Author Spotlight: Advancements in Molecular Biomarker Testing for Non-Squamous Non-Small Cell Lung Cancer
Published on: September 8, 2023
Elucidating the potential of EGFR mutated NSCLC and identifying its multitargeted inhibitors
Anakha D Rajeeve1,2, Ramasamy Yamuna3,4, P K Krishnan Namboori5,6,7,8
1Department of Chemistry, Amrita School of Physical Sciences Coimbatore, Amrita Vishwa Vidyapeetham, Coimbatore, India.
Abstract:
Lung cancer is the leading cause of cancer-related fatalities globally, accounting for the highest mortality rate among both men and women. Mutations in the epidermal growth factor receptor (EGFR) gene are frequently found in non-small cell lung cancer (NSCLC). Since curcumin and CB[2]UN support various medicinal applications in drug delivery and design, we investigated the effect of curcumin and CB[2]UN-based drugs in controlling EGFR-mutant NSCLC through a dodecagonal computational approach. Molecular docking studies revealed that the ligands curcumin (-6.9 kcal/mol) and CB[2]UN (-8.1 kcal/mol) bound more strongly to the EGFR-mutant NSCLC proteins with 2ITX and 2ITV, respectively. Molecular dynamics simulation (50 ns) investigation of protein-ligand complexes using RMSD, RMSF, Rg, and SASA indicated that curcumin and CB[2]UN with EGFR-mutant proteins are kinetically stable. In addition, MMPBSA/MMGBSA analysis confirmed the thermodynamic stability of each curcumin and CB[2]UN protein-ligand complex. Finally, KDeep absolute binding affinity calculations show energies of -6.13 kcal/mol and - 5.26 kcal/mol for 2ITX-CUR and 2ITV-CB[2]UN protein-ligand complexes, respectively. Thus, our dodecagonal strategy reveals that 2ITX-CUR and 2ITV-CB[2]UN are more likely to form protein-ligand complexes with more significant binding affinities and excellent stability throughout the 50 ns simulation time.
Insights
Curcumin and CB[2]UN show strong binding and stability against EGFR-mutant non-small cell lung cancer (NSCLC) proteins. This computational study highlights their potential as therapeutic agents for lung cancer treatment.
Area of Science:
- Computational chemistry
- Molecular modeling
- Drug discovery
Background:
- Lung cancer is a leading cause of cancer mortality worldwide.
- Epidermal growth factor receptor (EGFR) gene mutations are common in non-small cell lung cancer (NSCLC).
- Curcumin and CB[2]UN possess medicinal properties relevant to drug delivery.
Purpose of the Study:
- To investigate the efficacy of curcumin and CB[2]UN in controlling EGFR-mutant NSCLC using a dodecagonal computational approach.
- To assess the binding affinity and stability of curcumin and CB[2]UN with EGFR-mutant NSCLC proteins.
Main Methods:
- Molecular docking studies were performed to evaluate ligand-protein interactions.
- Molecular dynamics simulations (50 ns) assessed kinetic stability using RMSD, RMSF, Rg, and SASA.
- MMPBSA/MMGBSA and KDeep calculations determined thermodynamic stability and absolute binding affinities.
Main Results:
- Curcumin and CB[2]UN exhibited strong binding affinities to EGFR-mutant NSCLC proteins (2ITX and 2ITV, respectively).
- Molecular dynamics simulations indicated kinetic stability of the protein-ligand complexes.
- Thermodynamic analysis confirmed the stability, with KDeep calculations showing significant binding energies (-6.13 kcal/mol for 2ITX-CUR and -5.26 kcal/mol for 2ITV-CB[2]UN).
Conclusions:
- The dodecagonal computational strategy suggests that 2ITX-CUR and 2ITV-CB[2]UN complexes possess high binding affinities and excellent stability.
- Curcumin and CB[2]UN show promise as potential therapeutic agents for EGFR-mutant NSCLC.
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