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Updated: May 29, 2025

Diagnosing Pulmonary Tuberculosis with the Xpert MTB/RIF Test
Published on: April 9, 2012
Stool-based Xpert testing for diagnosis of TB in children and critically ill adults
W Mwanza1, M Lutinala2, K Mundia3
1Ministry of Health, Lusaka, Zambia;, USAID-STAR Project, Washington DC, USA.
Insights
Stool-based Xpert MTB/RIF Ultra testing significantly improved tuberculosis diagnosis in Zambian children, increasing case notifications and confirmation rates. This method offers a vital alternative for children unable to provide sputum or gastric aspirate samples.
Area of Science:
- Public Health
- Infectious Diseases
- Diagnostics
Background:
- Tuberculosis (TB) diagnosis in children, especially in resource-limited settings, presents challenges due to difficulties in sample collection.
- Sputum and gastric aspirate (GA) are conventional samples, but not always feasible for pediatric TB diagnosis.
- Xpert MTB/RIF Ultra (Xpert) is a rapid molecular test for TB detection.
Purpose of the Study:
- To evaluate the routine implementation and impact of stool-based Xpert MTB/RIF Ultra testing for diagnosing childhood TB in Zambia.
- To assess the utility of stool samples as an alternative to sputum or GA for Xpert testing in children and critically ill adults.
Main Methods:
- Method validation comparing Xpert results from stool, sputum, and GA specimens.
- Review of 18 months of routine implementation data for stool-based Xpert testing.
- Analysis of childhood TB notifications and bacteriological confirmation rates before and after implementation.
Main Results:
- Method validation showed 98.0% agreement between Xpert results on stool and conventional samples.
- Over 18 months, 16,210 stool samples identified 157 TB cases in children and 45 in critically ill adults.
- In children aged 0-4 years, stool testing volume significantly exceeded GA testing (10,288 vs. 2,459).
- Childhood TB notifications rose by 30% and bacteriological confirmation by 53% in 2021 compared to 2020.
Conclusions:
- Routine stool-based Xpert testing enhances access to TB diagnosis for children unable to produce sputum or undergo GA collection.
- The implementation led to increased bacteriological confirmation of TB in children.
- This approach also facilitated rapid testing for critically ill adults with sputum expectoration difficulties.
Abstract:
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