Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Gauss's Law: Problem-Solving01:10

Gauss's Law: Problem-Solving

1.6K
Gauss's law helps determine electric fields even though the law is not directly about electric fields but electric flux. In situations with certain symmetries (spherical, cylindrical, or planar) in the charge distribution, the electric field can be deduced based on the knowledge of the electric flux. In these systems, we can find a Gaussian surface S over which the electric field has a constant magnitude. Furthermore, suppose the electric field is parallel (or antiparallel) to the area...
1.6K
Design Example: Traverse Angle Computations01:25

Design Example: Traverse Angle Computations

54
Traverse angle computations are a critical component of surveying, used to compute the internal angles within a closed traverse. A traverse consists of a series of connected lines forming a closed loop, often used for land boundary delineation or mapping. Calculating the internal angles ensures accuracy in the traverse geometry and is essential for checking survey data integrity.The process begins with known azimuths and bearings of the traverse sides. Internal angles at each vertex are...
54
Gauss's Law: Planar Symmetry01:27

Gauss's Law: Planar Symmetry

7.8K
A planar symmetry of charge density is obtained when charges are uniformly spread over a large flat surface. In planar symmetry, all points in a plane parallel to the plane of charge are identical with respect to the charges. Suppose the plane of the charge distribution is the xy-plane, and the electric field at a space point P with coordinates (x, y, z) is to be determined. Since the charge density is the same at all (x, y) - coordinates in the z = 0 plane, by symmetry, the electric field at P...
7.8K
Transformation of Plane Strain01:12

Transformation of Plane Strain

152
When analyzing elongated structures like bars subjected to uniformly distributed loads, it is essential to understand the transformation of plane strain when coordinate axes are rotated. This transformation helps to assess how material deformation characteristics vary with orientation, which is crucial in materials science and structural engineering.
Under plane strain conditions, typical for members where one dimension significantly exceeds the others, deformations and resultant strains are...
152
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving01:29

Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving

38
Mechanistic models play a crucial role in algorithms for numerical problem-solving, particularly in nonlinear mixed effects modeling (NMEM). These models aim to minimize specific objective functions by evaluating various parameter estimates, leading to the development of systematic algorithms. In some cases, linearization techniques approximate the model using linear equations.
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
38
Acceleration Vectors01:30

Acceleration Vectors

7.9K
In everyday conversation, accelerating means speeding up. Acceleration is a vector in the same direction as the change in velocity, Δv, therefore the greater the acceleration, the greater the change in velocity over a given time. Since velocity is a vector, it can change in magnitude, direction, or both. Thus acceleration is a change in speed or direction, or both. For example, if a runner traveling at 10 km/h due east slows to a stop, reverses direction, and continues their run at 10 km/h...
7.9K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Making excited state MD faster: Extrapolation of transition densities for TD-DFT calculations.

The Journal of chemical physics·2026
Same author

The Accommodation of Excess Charge in Binary Particle Lattices: A Many-Body Electrostatic Study.

The journal of physical chemistry. B·2025
Same author

Approximations of the Iterative Stockholder Analysis scheme using exponential basis functions.

The Journal of chemical physics·2025
Same author

Multi-center decomposition of molecular densities: A numerical perspective.

The Journal of chemical physics·2025
Same author

Importance of Polarizable Embedding for Computing Optical Rotation: The Case of Camphor in Ethanol.

The journal of physical chemistry letters·2024
Same author

The OpenMMPol library for polarizable QM/MM calculations of properties and dynamics.

The Journal of chemical physics·2024
Same journal

Knowledge Distillation of a Protein Language Model Yields a Foundational Implicit Solvent Model.

Journal of chemical theory and computation·2026
Same journal

Generalizable Protein Folding Pathway Exploration with DA2-GRASP: Extending Beyond Miniproteins.

Journal of chemical theory and computation·2026
Same journal

Improving PCM in Protic Media: Markov State Models for TD-DFT Calculations.

Journal of chemical theory and computation·2026
Same journal

Efficient Coupled-Cluster Python Frameworks for Next-Generation GPUs: A Comparative Study of CuPy and PyTorch on the Hopper and Grace Hopper Architecture.

Journal of chemical theory and computation·2026
Same journal

Extending the MARTINI 3 Coarse-Grained Force Field to Polypeptoids.

Journal of chemical theory and computation·2026
Same journal

Statistical Mechanics of Density- and Temperature-Dependent Potentials: Application to Condensed Phases within GenDPDE.

Journal of chemical theory and computation·2026
See all related articles

Related Experiment Video

Updated: May 29, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.1K

Grassmann Extrapolation for Accelerating Geometry Optimization.

Zahra Askarpour1, Michele Nottoli1, Benjamin Stamm1

  • 1Institute of Applied Analysis and Numerical Simulation, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany.

Journal of Chemical Theory and Computation
|February 7, 2025
PubMed
Summary
This summary is machine-generated.

This study enhances geometry optimization using the Grassmann extrapolation (G-Ext) method. G-Ext accelerates self-consistent field convergence, especially for large molecular systems.

More Related Videos

In situ Grazing Incidence Small Angle X-ray Scattering on Roll-To-Roll Coating of Organic Solar Cells with Laboratory X-ray Instrumentation
06:49

In situ Grazing Incidence Small Angle X-ray Scattering on Roll-To-Roll Coating of Organic Solar Cells with Laboratory X-ray Instrumentation

Published on: March 2, 2021

6.2K
Spatial Multiobjective Optimization of Agricultural Conservation Practices using a SWAT Model and an Evolutionary Algorithm
11:53

Spatial Multiobjective Optimization of Agricultural Conservation Practices using a SWAT Model and an Evolutionary Algorithm

Published on: December 9, 2012

12.9K

Related Experiment Videos

Last Updated: May 29, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.1K
In situ Grazing Incidence Small Angle X-ray Scattering on Roll-To-Roll Coating of Organic Solar Cells with Laboratory X-ray Instrumentation
06:49

In situ Grazing Incidence Small Angle X-ray Scattering on Roll-To-Roll Coating of Organic Solar Cells with Laboratory X-ray Instrumentation

Published on: March 2, 2021

6.2K
Spatial Multiobjective Optimization of Agricultural Conservation Practices using a SWAT Model and an Evolutionary Algorithm
11:53

Spatial Multiobjective Optimization of Agricultural Conservation Practices using a SWAT Model and an Evolutionary Algorithm

Published on: December 9, 2012

12.9K

Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Molecular Modeling

Background:

  • The self-consistent field (SCF) procedure is crucial for electronic structure calculations.
  • Geometry optimization is essential for determining molecular structures and properties.
  • Existing methods for SCF convergence can be slow, particularly for large systems.

Purpose of the Study:

  • To adapt and apply the Grassmann extrapolation (G-Ext) method for accelerating geometry optimization.
  • To investigate the effectiveness of G-Ext in improving SCF convergence speed.
  • To identify optimal parameters and computational strategies for G-Ext in molecular geometry optimization.

Main Methods:

  • Extension of the Grassmann extrapolation (G-Ext) method from Born-Oppenheimer molecular dynamics to geometry optimization.
  • Utilizing density matrices from preceding optimization steps.
  • Application of a nonlinear, structure-preserving mapping onto the Grassmann manifold for initial guess generation.

Main Results:

  • Demonstrated significant acceleration of the self-consistent field (SCF) convergence.
  • G-Ext method shows excellent performance improvements, particularly for large molecular systems.
  • Identification of optimal parameters and computational strategies through diverse molecular testing.

Conclusions:

  • The adapted G-Ext method is effective in accelerating geometry optimization.
  • G-Ext provides a robust approach for improving SCF convergence in computational chemistry.
  • This method offers a valuable tool for efficient molecular modeling, especially for complex systems.