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Inhibition of complement system-related gene ITGB2 attenuates epithelial-mesenchymal transition and inflammation in
Jun Peng1, Wenqi Zhao2, Lu Zhou2
1Nephrology Department, Central Theater Command General Hospital of the Chinese People's Liberation Army, No.627, Wuluolu, Wuchang District, Wuhan, 430070, Hubei, China. 30832644@qq.com.
Purpose:
Emerging evidences have indicated a role of the complement system in the pathogenesis of diabetic nephropathy (DN). Thus, this study was conducted to explore the complement system-related key biomarkers for patients with DN.
Methods:
DN microarray datasets were downloaded from the GEO database, followed by differentially expressed genes (DEGs) screening. Complement system-related genes (CSRGs) were searched from various databases. Weighted Gene Co-expression Network Analysis (WGCNA) was employed to screen the DN-related genes, then the differential CSRGs (DCSRGs) were identified, followed by protein-protein interaction (PPI) network construction. In addition, key biomarkers were acquired by two machine learning algorithms, then immune infiltration analysis, Gene Set Enrichment Analysis (GSEA), and potential drugs screening were conducted. Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) and western blotting were utilized to detect the ITGB2 expression. Then the cell viability, inflammatory factors, and the expression of epithelial-mesenchymal transition (EMT) and fibrosis markers were determined by using Cell Counting Kit-8 (CCK-8) assay, enzyme linked immunosorbent assay (ELISA), western blotting assays, respectively.
Results:
In total, 1012 DEGs and 974 DN-related genes were screened, and intersection analysis of the three (DN-related genes, DEGs and CSRGs) yielded 13 intersection genes, which were considered as the DCSRGs. Subsequently, 2 key biomarkers were identified by machine learning, namely VWF and ITGB2. The VWF and ITGB2 were both enriched in the pathways of chemokine signaling pathway, CAMs, focal adhesion and natural killer cell-mediated cytotoxicity, and significantly correlated with the activated mast cells, resting NK cells, and macrophages. Also, VWF and ITGB2 were significantly related to the clinical features, including age, serum creatinine level, and GFR (MDRD). Besides, mRNA and protein expression levels of ITGB2 in HG-treated HK-2 cells were remarkably elevated. Moreover, the viability of HK-2 cells, expression of TNF-α, IL-6, IL-12, α-SMA, E-cadherin and vimentin in HK-2 cells changed by HG administration were reversed by ITGB2-silence.
Conclusion:
Complement system-related gene ITGB2 was overexpressed in DN, and inhibition of ITGB2 attenuated EMT and inflammation in DN.
Insights
The complement system plays a role in diabetic nephropathy (DN). This study identified ITGB2 as a key biomarker, finding that inhibiting ITGB2 reduces inflammation and epithelial-mesenchymal transition in DN.
Area of Science:
- Immunology
- Nephrology
- Genomics
Background:
- The complement system is implicated in the development of diabetic nephropathy (DN).
- Identifying key biomarkers is crucial for understanding DN pathogenesis and developing targeted therapies.
Purpose of the Study:
- To explore complement system-related key biomarkers in patients with diabetic nephropathy (DN).
- To investigate the role of identified biomarkers in DN progression and potential therapeutic targets.
Main Methods:
- Utilized microarray datasets from the GEO database to identify differentially expressed genes (DEGs) in DN.
- Employed Weighted Gene Co-expression Network Analysis (WGCNA) and machine learning algorithms to screen for complement system-related genes (CSRGs) and identify key biomarkers.
- Conducted in vitro experiments using high-glucose-treated HK-2 cells to validate the role of ITGB2, including assessing cell viability, inflammatory markers, and epithelial-mesenchymal transition (EMT) and fibrosis markers.
Main Results:
- Identified 13 differential complement system-related genes (DCSRGs) and pinpointed VWF and ITGB2 as key biomarkers through machine learning.
- VWF and ITGB2 were significantly correlated with immune cell infiltration (mast cells, NK cells, macrophages) and clinical features of DN (age, serum creatinine, GFR).
- ITGB2 was overexpressed in high-glucose-treated HK-2 cells, and its inhibition reversed high-glucose-induced changes in cell viability, inflammation, and EMT/fibrosis markers.
Conclusions:
- The complement system-related gene ITGB2 is overexpressed in diabetic nephropathy (DN).
- Inhibition of ITGB2 demonstrated a protective effect by attenuating epithelial-mesenchymal transition (EMT) and inflammation in DN models.
- ITGB2 represents a potential therapeutic target for managing diabetic nephropathy.
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