Related Experiment Video
Updated: May 28, 2025

Modeling the Functional Network for Spatial Navigation in the Human Brain
Published on: October 13, 2023
Comparison by partition-Finding Petri nets similarity on the basis of subnets
Bartłomiej Szawulak1, Marcin Radom2, Piotr Formanowicz1
1Institute of Computing Science, Poznan University of Technology, Piotrowo 2, Poznań, 60-965, Poland.
Abstract:
Petri nets are used for modeling in many scientific areas. The existence of a large number of models gives a possibility for their comparison in search of desired or undesired characteristic structures. Unfortunately, there are only few comparison methods dedicated for Petri nets, and a search for new efficient approaches is still ongoing. We propose a new comparison algorithm dedicated for Petri net-based models of biological systems. It is based on a decomposition of compared networks into sets of subnets of biological significance that are then compared in search for a common structure. The presented algorithm has been implemented as a new module of a software tool named Holmes, which is available at https://www.cs.put.poznan.pl/mradom/Holmes/holmes.html.
Related Concept Videos
Protein Networks
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
¹H NMR Chemical Shift Equivalence: Homotopic and Heterotopic Protons
Interpreting ¹H NMR Signal Splitting: The (n + 1) Rule

