Integrating Hypoxia Signatures from scRNA-seq and Bulk Transcriptomes for Prognosis Prediction and Precision Therapy in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma
- Kexin Yu 1, Shibo Zhang 1, Jiali Shen 1, Meini Yu 1, Yangguang Su 1, Ying Wang 1, Kun Zhou 1, Lei Liu 1, Xiujie Chen 1
- Kexin Yu 1, Shibo Zhang 1, Jiali Shen 1
- 1Department of Pharmacogenomics, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China.
- 0Department of Pharmacogenomics, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China.
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View abstract on PubMed
Summary
This summary is machine-generated.This study identifies hypoxia-related genes in cervical cancer (CESC) and develops a risk score (CSHRS) model. This model aids in predicting prognosis and guiding personalized treatment strategies for CESC patients.
Area Of Science
- Oncology
- Genomics
- Biostatistics
Background
- Hypoxia is prevalent in cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC), contributing to tumor heterogeneity.
- Understanding hypoxia mechanisms is crucial for developing personalized CESC therapies.
Purpose Of The Study
- To identify CESC-specific hypoxia-related genes.
- To construct a prognostic risk model (CSHRS) for CESC.
- To integrate clinicopathological features for precision treatment strategies.
Main Methods
- Weighted Gene Correlation Network Analysis (WGCNA) and FindMarkers for gene identification.
- Least Absolute Shrinkage and Selection Operator (LASSO) and Cox regression for risk model construction.
- Analysis of immune infiltration, mutations, and drug resistance in relation to the risk model.
Main Results
- Identified CESC-specific hypoxia gene sets.
- Developed a CSHRS risk model classifying patients into distinct prognostic groups.
- Demonstrated the model's ability to evaluate tumor microenvironment and predict outcomes.
Conclusions
- The CSHRS risk model provides comprehensive insights into CESC tumor microenvironment.
- This model offers accurate prognostic predictions and supports personalized treatment decisions for CESC.
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