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Updated: May 28, 2025

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Vision Transformers for Low-Quality Histopathological Images: A Case Study on Squamous Cell Carcinoma Margin
So-Yun Park1,2, Gelan Ayana2,3, Beshatu Debela Wako4
1Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi 39253, Republic of Korea.
Abstract:
Background/Objectives: Squamous cell carcinoma (SCC), a prevalent form of skin cancer, presents diagnostic challenges, particularly in resource-limited settings with a low-quality imaging infrastructure. The accurate classification of SCC margins is essential to guide effective surgical interventions and reduce recurrence rates. This study proposes a vision transformer (ViT)-based model to improve SCC margin classification by addressing the limitations of convolutional neural networks (CNNs) in analyzing low-quality histopathological images. Methods: This study introduced a transfer learning approach using a ViT architecture customized with additional flattening, batch normalization, and dense layers to enhance its capability for SCC margin classification. A performance evaluation was conducted using machine learning metrics averaged over five-fold cross-validation and comparisons were made with the leading CNN models. Ablation studies have explored the effects of architectural configuration on model performance. Results: The ViT-based model achieved superior SCC margin classification with 0.928 ± 0.027 accuracy and 0.927 ± 0.028 AUC, surpassing the highest performing CNN model, InceptionV3 (accuracy: 0.86 ± 0.049; AUC: 0.837 ± 0.029), demonstrating robustness of ViT over CNN for low-quality histopathological images. Ablation studies have reinforced the importance of tailored architectural configurations for enhancing diagnostic performance. Conclusions: This study underscores the transformative potential of ViTs in histopathological analysis, especially in resource-limited settings. By enhancing diagnostic accuracy and reducing dependence on high-quality imaging and specialized expertise, it presents a scalable solution for global cancer diagnostics. Future research should prioritize optimizing ViTs for such environments and broadening their clinical applications.
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