Related Experiment Video
Updated: May 2, 2026

Deep Learning-Based Segmentation of Cryo-Electron Tomograms
Published on: November 11, 2022
Few-shot learning for non-vitrified ice segmentation
Alma Vivas-Lago1, Daniel Castaño-Díez2
1Basque Centre for Biophysics (CSIC-UPV/EHU), Bilbao, Spain. alma.vivas@csic.es.
Abstract:
This study introduces Ice Finder, a novel tool for quantifying crystalline ice in cryo-electron tomography, addressing a critical gap in existing methodologies. We present the first application of the meta-learning paradigm to this field, demonstrating that diverse tomographic tasks across datasets can be unified under a single meta-learning framework. By leveraging few-shot learning, our approach enhances domain generalization and adaptability to domain shifts, enabling rapid adaptation to new datasets with minimal examples. Ice Finder's performance is evaluated on a comprehensive set of in situ datasets from EMPIAR, showcasing its ease of use, fast processing capabilities, and millisecond inference times.

