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Updated: May 27, 2025

Use of Alu Element Containing Minigenes to Analyze Circular RNAs
Published on: March 10, 2020
Circular RNA APP contributes to Alzheimer's disease pathogenesis by modulating microglial polarization via
Deng-Pan Wu1,2, Yan-Su Wei1, Li-Xiang Hou1
1Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, Pharmacy School, Xuzhou Medical University, Xuzhou, 221004, Jiangsu, China.
Background:
Abnormal microglial polarization phenotypes contribute to the pathogenesis of Alzheimer's disease (AD). Circular RNAs (circRNAs) have garnered increasing attention due to their significant roles in human diseases. Although research has demonstrated differential expression of circRNAs in AD, their specific functions in AD pathogenesis remain largely unexplored.
Methods:
CircRNA microarray was performed to identify differentially expressed circRNAs in the hippocampus of APP/PS1 and WT mice. The stability of circAPP was assessed via RNase R treatment assay. CircAPP downstream targets miR-1906 and chloride intracellular channel 1 (CLIC1) were identified using bioinformatics and proteomics, respectively. RT-PCR assay was conducted to detect the expression of circAPP, miR-1906 and CLIC1. Morris water maze (MWM) test, passive avoidance test and novel object recognition task were used to detect cognitive function of APP/PS1 mice. Microglial M1/M2 polarization and AD pathology were assessed using Western blot, flow cytometry and Golgi staining assays. CLIC1 expression and channel activity were evaluated using Western blot and functional chloride channel assays, respectively. The subcellular location of circAPP was assessed via FISH and RT-PCR assays. RNA pull-down assay was performed to detect the interaction of miR-1906 with circAPP and 3' untranslated region (3'UTR) of CLIC1 mRNA.
Results:
In this study, we identified a novel circRNA, named circAPP, that is encoded by amyloid precursor protein (APP) and is implicated in AD. CircAPP is a stable circRNA that was upregulated in Aβ-treated microglial cells and the hippocampus of APP/PS1 mice. Downregulation of circAPP or CLIC1, or overexpression of miR-1906 in microglia modulated microglial M1/M2 polarization in Aβ-treated microglial cells and the hippocampus of APP/PS1 mice, and improved AD pathology and the cognitive function of APP/PS1 mice. Further results revealed that circAPP was mainly distributed in the cytoplasm, and circAPP could regulate CLIC1 expression and channel activity by interacting with miR-1906 and affecting miR-1906 expression, thereby regulating microglial polarization in AD.
Conclusions:
Taken together, our study elucidates the regulatory role of circAPP in AD microglial polarization via miR-1906/CLIC1 axis, and suggests that circAPP may act as a critical player in AD pathogenesis and represent a promising therapeutic target for AD.
Insights
This study identifies circAPP, a novel circular RNA, as a key regulator in Alzheimer's disease (AD) pathogenesis. CircAPP influences microglial polarization through the miR-1906/CLIC1 pathway, offering a potential therapeutic target for AD.
Area of Science:
- Neuroscience
- Molecular Biology
- Genetics
Background:
- Abnormal microglial polarization is implicated in Alzheimer's disease (AD) pathogenesis.
- Circular RNAs (circRNAs) play significant roles in human diseases, with their specific functions in AD largely unexplored.
Purpose of the Study:
- To identify and characterize novel circRNAs involved in AD pathogenesis.
- To elucidate the functional role of circAPP in microglial polarization and AD progression.
Main Methods:
- CircRNA microarray analysis identified differentially expressed circRNAs in AD mouse models.
- Bioinformatics and proteomics identified circAPP targets miR-1906 and CLIC1.
- Behavioral tests, molecular assays, and cell-based experiments assessed circAPP function in AD.
Main Results:
- A novel circRNA, circAPP, encoded by APP, was upregulated in AD models.
- CircAPP regulates microglial M1/M2 polarization via the miR-1906/CLIC1 axis.
- Modulating circAPP, miR-1906, or CLIC1 improved AD pathology and cognitive function in mice.
Conclusions:
- CircAPP plays a critical role in AD pathogenesis by regulating microglial polarization.
- The circAPP/miR-1906/CLIC1 axis represents a potential therapeutic target for Alzheimer's disease.
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