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Updated: May 27, 2025

Using Multi-fluorinated Bile Acids and In Vivo Magnetic Resonance Imaging to Measure Bile Acid Transport
Published on: November 27, 2016
Bile acid and microbiome interactions in the developing child
Mary Elizabeth M Tessier1, Benjamin L Shneider1, Joseph F Petrosino2
1Section of Pediatric Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, Baylor College of Medicine/Texas Children's Hospital, Houston, Texas, USA.
Insights
The infant gut microbiome and bile acid pool mature over time, influencing pediatric liver disease. Understanding these interactions is key to developing new therapies for cholestatic liver conditions.
Area of Science:
- Gastroenterology and Hepatology
- Microbiology
- Pediatric Medicine
Background:
- Bile acid metabolism and gut microbial composition differ significantly between infants and adults.
- The infant gut microbiome evolves from a simple, Bifidobacterium-dominant community to a diverse, adult-like state.
- This microbial succession impacts the maturation of the bile acid pool through microbial activities like deconjugation and oxidation.
Purpose of the Study:
- To review the differences in the pediatric versus adult intestinal microbiome and bile acid pool.
- To discuss the critical interactions between gut microbes and bile acids during early life.
- To explore how these interactions impact outcomes in infants and children with cholestatic liver disease, such as biliary atresia.
Main Methods:
- Literature review focusing on pediatric and adult gut microbiome and bile acid studies.
- Comparative analysis of microbial succession and bile acid pool maturation in early life.
- Exploration of the bidirectional relationship between the microbiome and bile acids in pediatric liver disease.
Main Results:
- Infant gut microbiomes are initially simple, with a bile acid pool dominated by primary bile acids.
- Microbial succession leads to increased microbial diversity and the generation of secondary bile acids.
- Altered bile acid profiles can influence microbiome development, and vice versa, impacting liver health.
Conclusions:
- The dynamic interplay between the gut microbiome and bile acids is crucial for normal development and health in children.
- Dysregulation of this interaction is implicated in pediatric cholestatic liver diseases.
- Further understanding of these mechanisms can inform novel therapeutic strategies for pediatric liver disorders.
Abstract:
Interactions between the gut microbiome and bile acids are complex and are linked to outcomes in pediatric liver disease by mechanisms that are incompletely understood. In adults, primary bile acids are synthesized in the liver and secreted into the intestine, where complex communities of gut microbes deconjugate, oxidize, epimerize, and 7α-dehydroxylate bile acids into a diverse array of unconjugated, secondary, allo-, iso-, and oxo-bile acids. In contrast, the infant gut microbiota contains a simple, Bifidobacterium-dominant community that transitions to a more diverse, adult-like community as additional microbes colonize the gut. This microbial succession gradually confers deconjugation, oxidation, epimerization, and 7α-dehydroxylation activities that mature the bile acid pool from a profile dominated by primary bile acids early in life to a more diverse, adult-like bile acid profile in later childhood. Altered bile acid profiles in pediatric cholestatic disorders have the potential to change the developmental trajectory of the microbiome. Conversely, alterations in the gut microbiome may re-shape the bile acid pool and hepatic bile acid metabolism. Understanding the mechanisms underlying these interactions will increase our understanding of liver pathophysiology and will motivate new therapeutic strategies for pediatric hepatic disorders. This review aims to highlight differences between the pediatric and adult intestinal microbiome and bile acid pool, and to discuss interactions between gut microbes and bile acids that are critical in early life and that may impact outcomes in infants and children with cholestatic liver disease, including biliary atresia.
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