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Updated: May 27, 2025

Rapid Identification of Gram Negative Bacteria from Blood Culture Broth Using MALDI-TOF Mass Spectrometry
Published on: May 28, 2014
Australian Group on Antimicrobial Resistance (AGAR) Australian Gram-negative Surveillance Outcome Program (GnSOP)
Jan M Bell1, Alicia Fajardo Lubian2,3, Sally R Partridge2,3,4
1Australian Group on Antimicrobial Resistance, Canberra, the Australian Capital Territory, Australia.
Abstract:
The Australian Group on Antimicrobial Resistance (AGAR) performs regular period-prevalence studies to monitor changes in antimicrobial resistance in selected enteric gram-negative pathogens. From 1 January 2023 to 31 December 2023, a total of 57 hospitals across Australia participated in the Australian Gram-negative Surveillance Outcome Program (GnSOP). The 2023 survey tested 10,453 isolates, comprising Enterobacterales (9,503; 90.9%), P. aeruginosa (806; 7.7%) and Acinetobacter species (144; 1.4%), using commercial automated methods. The results were analysed using European Committee on Antimicrobial Susceptibility Testing (EUCAST) breakpoints (January 2024). Key resistances reported are to the third-generation cephalosporin ceftriaxone in 12.9% of Escherichia coli and in 6.9% of Klebsiella pneumoniae complex isolates. Resistance rates to ciprofloxacin were 14.5% for E. coli; 7.8% for the K. pneumoniae complex; 3.2% for the Enterobacter cloacae complex; and 7.6% for P. aeruginosa. Resistance rates to piperacillin-tazobactam were 6.0%; 9.4%; 23.3%; and 13.7% for the same four species/complexes, respectively. Thirty Enterobacterales isolates from 30 patients were shown to harbour a carbapenemase gene: ten with a blaNDM gene (blaNDM-1 [4], blaNDM-5 [4], blaNDM-7 [2]); nine with a blaOXA-48-like gene (blaOXA-244 [4], blaOXA-48 [2], blaOXA-181 [1], blaOXA-232 [1], blaOXA-484 [1]); eight with blaIMP-4; two with blaNDM-5 + a blaOXA-181-like gene; and one with blaKPC-2 + blaNDM-5 + blaOXA-181. Transmissible carbapenemase genes were also detected in two Acinetobacter baumannii complex isolates (blaOXA-23; blaOXA-23 + blaOXA-58 + blaIMP-4) and one P. aeruginosa (blaIMP-4).
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