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Updated: May 27, 2025

Investigating the Pathogenesis of MYH7 Mutation Gly823Glu in Familial Hypertrophic Cardiomyopathy using a Mouse Model
Published on: August 8, 2022
Genes Associated With Hypertrophic Cardiomyopathy: A Reappraisal by the ClinGen Hereditary Cardiovascular Disease
Sophie Hespe1, Amber Waddell2, Babken Asatryan3
1Genomics and Inherited Disease Program, Garvan Institute of Medical Research, and UNSW Sydney, Sydney, New South Wales, Australia.
Insights
This study reappraised hypertrophic cardiomyopathy (HCM) genes, upgrading 3 and downgrading 9. It identified 29 genes with definitive, strong, or moderate evidence for causing HCM or left ventricular hypertrophy.
Area of Science:
- Genetics
- Cardiology
- Molecular Biology
Background:
- Hypertrophic cardiomyopathy (HCM) is a common inherited cardiac condition with significant genetic causes.
- Previous gene curation in 2019 identified 57 HCM-associated genes, but further evaluation is needed due to genetic heterogeneity.
Purpose of the Study:
- To reappraise the clinical validity of previously curated and newly identified genes associated with HCM.
- To update the classification of gene-disease relationships for HCM and related syndromic conditions involving left ventricular hypertrophy.
Main Methods:
- Utilized the Clinical Genome Resource systematic gene curation framework.
- Reclassified 31 previously curated genes and evaluated 5 new potential HCM-associated genes.
- Conducted twice-monthly calls with the Hereditary Cardiovascular Disease (HCVD) Gene Curation Expert Panel (GCEP) comprising 29 experts from 21 institutions.
Main Results:
- Seventeen of 31 recurated genes changed classification, with 3 clinically relevant upgrades, including TNNC1 as a definitive sarcomere gene.
- Two genes were curated for multiple inheritance patterns (TRIM63, ALPK3), and CSRP3 was classified for semidominant inheritance.
- Nine genes were downgraded to disputed, and 5 newly reported HCM genes were classified (RPS6KB1, RBM20, KLHL24, MT-TI, FHOD3).
Conclusions:
- Identified 29 genes with definitive, strong, or moderate evidence for causing HCM or isolated left ventricular hypertrophy.
- The updated gene classifications provide crucial information for genetic testing and clinical reporting of HCM.
- This systematic reappraisal enhances understanding of the genetic landscape of HCM and related cardiovascular conditions.
Background:
Hypertrophic cardiomyopathy (HCM) is an inherited cardiac condition affecting ∼1 in 500 and exhibits marked genetic heterogeneity. Previously published in 2019, 57 HCM-associated genes were curated providing the first systematic evaluation of gene-disease validity.
Objectives:
The authors report work by the Clinical Genome Resource Hereditary Cardiovascular Disease (HCVD) Gene Curation Expert Panel (GCEP) to reappraise the clinical validity of previously curated and new putative HCM genes.
Methods:
The Clinical Genome Resource systematic gene curation framework was used to reclassify the gene-disease relationships for HCM and related syndromic entities involving left ventricular hypertrophy. Genes previously curated were included if their classification was not definitive, and if the time since curation was >2 to 3 years. New genes with literature assertions for HCM were included for initial evaluation. Existing genes were curated for new inheritance patterns where evidence existed. Curations were presented on twice monthly calls, with the HCVD GCEP composed of 29 individuals from 21 institutions across 6 countries.
Results:
Thirty-one genes were recurated and an additional 5 new potential HCM-associated genes were curated. Among the recurated genes, 17 (55%) genes changed classification: 1 limited and 4 disputed (from no known disease relationship), 9 disputed (from limited), and 3 definitive (from moderate). Among these, 3 (10%) genes had a clinically relevant upgrade, including TNNC1, a 9th sarcomere gene with definitive HCM association. With new evidence, 2 genes were curated for multiple inheritance patterns (TRIM63, disputed for autosomal dominant but moderate for autosomal recessive; ALPK3, strong for autosomal dominant and definitive for recessive). CSRP3 was curated for a semidominant mode of inheritance (definitive). Nine (29%) genes were downgraded to disputed, further discouraging clinical reporting of variants in these genes. Five genes recently reported to cause HCM were curated: RPS6KB1 and RBM20 (limited), KLHL24 and MT-TI (moderate), and FHOD3 (definitive).
Conclusions:
We report 29 genes with definitive, strong, or moderate evidence of causation for HCM or isolated left ventricular hypertrophy, including sarcomere, sarcomere-associated, and syndromic conditions.
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