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Updated: May 27, 2025

Real-Time fMRI Brain Mapping in Animals
Published on: September 24, 2020
Anesthetic Effects on Neuronally-based Resting-state Functional Connectivity (S43.008).
James Lai1, Tao Qin1, David Boas2
1Massachusetts General Hospital.
Tribromoethanol showed the highest functional connectivity in mice compared to ketamine/xylazine and isoflurane. This highlights the importance of choosing the right anesthetic for brain connectivity studies.
Area of Science:
- Neuroscience
- Anesthesiology
- Medical Imaging
Background:
- Resting-state functional connectivity (RSFC) measures correlated brain signals during rest.
- fMRI in humans tracks blood-oxygen-level-dependent (BOLD) signals for RSFC.
- Anesthetic effects on neuronal signals in mice are less understood than hemodynamic effects.
Purpose of the Study:
- Investigate how tribromoethanol, isoflurane, and ketamine/xylazine impact neuronally and hemodynamically based functional connectivity.
- Compare the effects of different anesthetics on brain activity and blood flow.
- Determine the optimal anesthetic for studying functional connectivity in mice.
Main Methods:
- Used Thy1-GCaMP6f mice with genetically encoded calcium indicators to monitor neuronal activity.
- Employed GCaMP fluorescence and optical intrinsic signal imaging.
- Administered tribromoethanol, isoflurane, and ketamine/xylazine sequentially to each mouse in a randomized order.
- Calculated bihemispheric connectivity index (BCI) and z-transformed correlation coefficients.
Main Results:
- Tribromoethanol demonstrated the highest bihemispheric connectivity index (BCI) for both neuronal and hemodynamic signals.
- Tribromoethanol's BCI was significantly higher than ketamine/xylazine and isoflurane.
- Ketamine/xylazine showed reduced variability and the highest correlation between neuronal and hemodynamic signals.
- All anesthetics exhibited high correlations between GCaMP and oxy-hemoglobin signals.
Conclusions:
- Tribromoethanol optimized BCI more effectively than ketamine/xylazine and isoflurane.
- Isoflurane exhibited significant variability in functional connectivity measures.
- Anesthetic selection is crucial for accurate functional connectivity studies in mice.
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