A KIF1C-CNBP motor-adaptor complex for trafficking mRNAs to cell protrusions
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Updated: May 26, 2025

Methods to Study Mrp4-containing Macromolecular Complexes in the Regulation of Fibroblast Migration
Published on: May 19, 2016
Konstadinos Moissoglu1, Tianhong Wang1, Alexander N Gasparski1
1Laboratory of Cellular and Molecular Biology, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Abstract:
mRNA localization to subcellular compartments is a widely used mechanism that functionally contributes to numerous processes. mRNA targeting can be achieved upon recognition of RNA cargo by molecular motors. However, our molecular understanding of how this is accomplished is limited, especially in higher organisms. We focus on a pathway that targets mRNAs to peripheral protrusions of mammalian cells and which is important for cell migration. Trafficking occurs through active transport on microtubules, mediated by the KIF1C kinesin. Here, we identify the RNA-binding protein CNBP as a factor required for mRNA localization to protrusions. CNBP binds directly to GA-rich sequences in the 3' UTR of protrusion-targeted mRNAs. CNBP also interacts with KIF1C and is required for KIF1C recruitment to mRNAs and their trafficking on microtubules to the periphery. This work provides a molecular mechanism for KIF1C recruitment to mRNA cargo and reveals a motor-adaptor complex for mRNA transport to cell protrusions.
Insights
This study identifies the RNA-binding protein CNBP as crucial for directing messenger RNA (mRNA) to cell protrusions. CNBP acts as an adaptor, linking mRNA to the kinesin motor KIF1C for transport, aiding cell migration.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- mRNA localization is vital for cellular functions, but mechanisms in complex organisms are not fully understood.
- Targeting mRNAs to specific cellular locations is often mediated by molecular motors interacting with RNA.
- Cell migration relies on precise mRNA distribution to cellular protrusions.
Purpose of the Study:
- To elucidate the molecular mechanism of mRNA transport to mammalian cell protrusions.
- To identify factors involved in recruiting molecular motors to specific mRNA cargoes.
- To understand the role of RNA-binding proteins in mRNA trafficking.
Main Methods:
- RNA immunoprecipitation (RIP) to identify mRNA targets of CNBP.
- Co-immunoprecipitation (Co-IP) to study protein-protein interactions.
- Immunofluorescence microscopy to visualize mRNA and protein localization.
- In vitro binding assays to confirm direct interactions.
Main Results:
- The RNA-binding protein CNBP directly binds to GA-rich sequences in the 3' UTR of mRNAs destined for cell protrusions.
- CNBP interacts with the kinesin motor KIF1C.
- CNBP is essential for recruiting KIF1C to target mRNAs and for their transport along microtubules to the cell periphery.
- This establishes CNBP as a key adaptor protein in mRNA motor complex formation.
Conclusions:
- CNBP acts as a crucial adaptor protein, linking specific mRNAs to the KIF1C motor for transport to cell protrusions.
- This mechanism provides a molecular basis for mRNA localization required for cell migration.
- The findings reveal a novel motor-adaptor complex essential for mRNA trafficking in higher organisms.
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