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Updated: May 26, 2025

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Published on: May 12, 2019
Overcoming Neuroanatomical Mapping and Computational Barriers in Human Brain Synaptic Architecture
Rahul Kumar1,2, Ethan Waisberg3, Joshua Ong4
1Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 1011 NW 15th Street, Gautier Building, MC R629, Miami, Florida, 33136-1019, USA. rahulca13@gmail.com.
None:
In this Matters Arising, we critically examine the data processing and computational challenges highlighted under the high-resolution, three-dimensional reconstruction of human cortical tissue by Shapson-Coe et al. While the study represents a technical milestone in connectomics, involving a 1.4-petabyte dataset derived from mapping a cubic millimeter of temporal cortex, the findings also reveal the substantial obstacles inherent in scaling such approaches to the entire human brain. Beyond the application of artificial intelligence (AI) for segmentation and synapse detection, the study underscores the immense complexity of data acquisition, cleaning, alignment, and visualization at this scale. This article contextualizes these challenges by comparing the computational and infrastructural requirements of the Shapson-Coe work to other large-scale neuroscience initiatives, such as the fruit fly brain atlas, and explores emerging technologies like quantum computing and neuromorphic hardware as potential solutions. Additionally, we discuss the ethical and logistical implications of managing zettabyte-scale datasets and emphasize the necessity of international collaboration to achieve the ambitious goal of mapping the human connectome. By critically addressing these challenges and potential solutions, this article aims to guide future advancements in the field of connectomics and their transformative applications in neuroscience, artificial intelligence, and medicine.

