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Determination of Crystal Structures01:29

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In the late 1800s, the revelation that light extended beyond visible wavelengths led to the discovery of X-rays by Wilhelm Roentgen. Recognized as high-energy electromagnetic radiation with short wavelengths, X-rays prompted exploration into their interaction with crystals. Max von Laue proposed in 1912 that the periodic arrangement of atoms, ions, or molecules in crystals would cause them to diffract X-rays, a hypothesis confirmed through experiments with copper sulfate and zinc sulfide...
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Schottky defects arise when some lattice points in a crystal, such as those in NaCl, remain unoccupied, creating lattice vacancies without disturbing the overall electrical neutrality of the crystal. This defect is common in ionic crystals where the positive and negative ions are similar in size, as seen in sodium chloride and cesium chloride. The presence of Schottky defects enables the crystal to conduct electricity to a small extent through an ionic mechanism. Electric fields cause nearby...
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Imperfections in Crystal Structure: Non-Stoichiometric Defects01:29

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Non-stoichiometric defects refer to a type of defect in the crystal structure of a compound where the ratio of its constituent elements deviates from the ideal stoichiometric ratio. There are two main types of non-stoichiometric defects: metal excess defects and metal deficiency defects.Metal excess defects occur when there is a slight surplus of metal ions than what is required by the stoichiometric ratio of the compound. For example, heating a sodium chloride crystal in sodium vapor results...
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Computation screening for incorrectly determined cocrystal structures.

Simona Chalupná1, Michal Hušák1, Jan Čejka1

  • 1Department of Solid State Chemistry, University of Chemistry and Technology Prague, Technicka 5, Prague, 166 28, Czechia.

Acta Crystallographica Section B, Structural Science, Crystal Engineering and Materials
|February 26, 2025
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Summary
This summary is machine-generated.

Computational methods can now reliably distinguish pharmaceutical salts from cocrystals, even in complex cases. The r2SCAN functional is recommended for accurate salt-cocrystal differentiation in drug formulation.

Keywords:
DFT-Dcocrystalcocrystal structuressaltverification

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Area of Science:

  • Solid-state chemistry
  • Computational materials science
  • Pharmaceutical formulation

Background:

  • Pharmaceutical salts and cocrystals are critical for drug formulation, but regulatory distinctions are significant despite minor structural differences.
  • Accurate differentiation is essential for drug development and regulatory approval.
  • Previous DFT-based methods showed promise but had limitations with certain hydrogen bond lengths.

Purpose of the Study:

  • To evaluate the benefits of the rSCAN functional over the PBE functional for distinguishing pharmaceutical salts and cocrystals.
  • To expand a computational dataset and validate the method on a larger scale.
  • To identify and investigate challenging cases at the salt-cocrystal continuum.

Main Methods:

  • Density Functional Theory (DFT) calculations using various functionals (PBE, rSCAN, r2SCAN, PBE0, PBE50).
  • Analysis of hydrogen bond lengths, particularly O-H...N interactions.
  • Experimental validation through single-crystal X-ray diffraction for ambiguous structures.

Main Results:

  • The expanded dataset of 404 models confirmed 301 cocrystals, identified 87 salt-cocrystal continuum forms, and flagged 16 cocrystals as potential salts.
  • Experimental investigation of seven problematic structures revealed five to be true salts.
  • The r2SCAN functional demonstrated reliability for O-H...N bonds longer than 2.554 Å, offering a balance of accuracy and efficiency.

Conclusions:

  • The r2SCAN functional is recommended for accurate and efficient salt-cocrystal differentiation in pharmaceutical solid-state analysis.
  • Computational methods, enhanced by advanced functionals, can significantly aid in classifying complex pharmaceutical solid forms.
  • This approach helps resolve ambiguities in distinguishing salts from cocrystals, crucial for regulatory compliance and drug development.