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Updated: May 20, 2026

Use of a High-throughput In Vitro Microfluidic System to Develop Oral Multi-species Biofilms
Published on: December 1, 2014
Hierarchical biofilm models using sodium alginate beads containing bacteria embedded in a cellulose-chitosan hydrogel
Shiwei Li1, Yuxuan Ji1, Xuxiang Xue1
1School of Engineering, Institute for Bioengineering, University of Edinburgh, The Kings Buildings, EH9 3JL Edinburgh, UK. michael.chen@ed.ac.uk.
Abstract:
In biofilm studies, a stable model is crucial for exploring infection mechanisms, antibiotic resistance, and evaluating materials' antibiofilm performance. Cultured biofilms often face challenges, such as slow maturation or rapid bacteria dispersion. Therefore, developing a stable, mature-stage biofilm model is critical for effective biofilm research. In this study, we report a beads-in-hydrogel biofilm model, in which sodium alginate (SA) hydrogel beads that contain bacteria are embedded within a chitosan-cellulose hydrogel film to simulate natural bacterial biofilms. This model can retain bacteria for a relatively long period of time, preventing their dispersion to the surrounding areas while keeping them viable. The reliability of the model was validated by measuring functional molecules, including extracellular DNA and biofilm-forming related proteins. Overall, this study presents a stable 3D beads-in-hydrogel biofilm model that effectively replicates natural biofilms, providing a reliable platform for exploring infection mechanisms, antibiotic resistance, and evaluating antibiofilm strategies.

