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Updated: May 24, 2025

Using Sniper-Cas9 to Minimize Off-target Effects of CRISPR-Cas9 Without the Loss of On-target Activity Via Directed Evolution
Published on: February 26, 2019
Engineering of SauriCas9 with enhanced specificity
Xiaoqi Zhang1, Chen Tao1, Miaomiao Li1
1Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, School of Life Sciences, Fudan University, Shanghai 200438, China.
SauriCas9-R253A, a modified Cas9 enzyme, significantly enhances specificity for gene editing. This improved variant shows promise for in vivo therapeutic applications with no detectable off-target effects in CAR-T cell therapy development.
Area of Science:
- Molecular Biology
- Gene Editing Technologies
- Biotechnology
Background:
- SauriCas9 is a compact Cas9 nuclease with potential for in vivo therapeutics.
- Off-target effects are a major concern for Cas9 specificity in therapeutic applications.
- Enhancing specificity is crucial for the safe and effective use of gene editing tools.
Purpose of the Study:
- To improve the specificity of the SauriCas9 nuclease.
- To develop a SauriCas9 variant with reduced off-target effects.
- To validate the efficacy of the enhanced SauriCas9 variant in gene disruption for CAR-T cell therapy.
Main Methods:
- Introduced mutations to SauriCas9 to eliminate polar contacts with target DNA, creating the SauriCas9-R253A variant.
- Utilized SauriCas9-R253A to disrupt key genes (B2M, TRAC, PDCD1) essential for allogeneic CAR-T cell therapy.
- Assessed gene disruption efficiency and evaluated off-target effects using sensitive detection methods.
Main Results:
- The SauriCas9-R253A variant demonstrated enhanced specificity compared to the wild-type.
- Efficient disruption of B2M, TRAC, and PDCD1 genes was achieved using SauriCas9-R253A.
- No detectable off-target effects were observed for the most efficient single-guide RNAs with SauriCas9-R253A.
Conclusions:
- SauriCas9-R253A represents a significant advancement in Cas9 specificity for gene editing.
- The enhanced specificity of SauriCas9-R253A supports its potential for safe in vivo therapeutic applications.
- This improved nuclease is a promising tool for developing next-generation CAR-T cell therapies.
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