Related Experiment Video

Updated: Jul 30, 2026

Author Spotlight: Bridging Gaps in Anatomy and Establishing a Foundation for Algorithmic Studies
04:25

Author Spotlight: Bridging Gaps in Anatomy and Establishing a Foundation for Algorithmic Studies

Published on: December 15, 2023

2.2K

TransRUPNet for Improved Polyp Segmentation

Debesh Jha, Nikhil Kumar Tomar, Debayan Bhattacharya

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
    |March 5, 2025
    PubMed

    Abstract:

    Colorectal cancer is among the most common cause of cancer worldwide. Removal of precancerous polyps through early detection is essential to prevent them from progressing to colon cancer. We develop an advanced deep learning-based architecture, Transformer based Residual Upsampling Network (TransRUPNet) for automatic and real-time polyp segmentation. The proposed architecture, TransRUPNet, is an encoder-decoder network consisting of three encoder and decoder blocks with additional upsampling blocks at the end of the network. With the image size of 256×256, the proposed method achieves an excellent real-time operation speed of 47.07 frames per second with an average mean dice coefficient score of 0.7786 and mean Intersection over Union of 0.7210 on the out-of-distribution polyp datasets. The results on the publicly available PolypGen dataset suggest that TransRUPNet can give real-time feedback while retaining high accuracy for in-distribution datasets. Furthermore, we demonstrate the generalizability of the proposed method by showing that it significantly improves performance on out-of-distribution dataset compared to the existing methods. The source code of our network is available at https://github.com/DebeshJha/TransRUPNet.

    More Related Videos

    Swin-PSAxialNet: An Efficient Multi-Organ Segmentation Technique
    04:48

    Swin-PSAxialNet: An Efficient Multi-Organ Segmentation Technique

    Published on: July 5, 2024

    348
    Leveraging Virtual Reality for Immersive Segmentation and Analysis of Cryo-Electron Tomography Data
    07:17

    Leveraging Virtual Reality for Immersive Segmentation and Analysis of Cryo-Electron Tomography Data

    Published on: January 24, 2025

    723

    Related Experiment Videos

    Last Updated: Jul 30, 2026

    Author Spotlight: Bridging Gaps in Anatomy and Establishing a Foundation for Algorithmic Studies
    04:25

    Author Spotlight: Bridging Gaps in Anatomy and Establishing a Foundation for Algorithmic Studies

    Published on: December 15, 2023

    2.2K
    Swin-PSAxialNet: An Efficient Multi-Organ Segmentation Technique
    04:48

    Swin-PSAxialNet: An Efficient Multi-Organ Segmentation Technique

    Published on: July 5, 2024

    348
    Leveraging Virtual Reality for Immersive Segmentation and Analysis of Cryo-Electron Tomography Data
    07:17

    Leveraging Virtual Reality for Immersive Segmentation and Analysis of Cryo-Electron Tomography Data

    Published on: January 24, 2025

    723

    Related Concept Videos

    Downstream Processing01:29

    Downstream Processing

    Downstream processing begins once fermentation is complete and involves a series of steps to recover and purify products such as acids, vitamins, antibiotics, or proteins.Cell HarvestingFor example, for intracellular protein-based products, the first step is harvesting the cells. This is typically achieved using centrifugation or filtration to separate the cells from the liquid phase.Cell Disruption for Intracellular ProductsIf the target product is intracellular, the harvested cells must be...

    Articles linked to this work by shared authors, journal, and citation graph.

    Advances in MRI in the Evaluation of Chronic Pancreatitis and the Less Common Forms of Pancreatitis.

    Advances in clinical radiology·2026

    Multicenter Validation of Foundation Model Adaptation for Automated Pancreatic Tumor Delineation on CT Scans.

    Cancers·2026

    Monoclonal Gammopathy with Double M-bands Mimicking Biclonal Gammopathy: A Case Series.

    EJIFCC·2026

    Explainable artificial intelligence in medical imaging: how to interpret, evaluate, and use artificial intelligence explanations.

    Diagnostic and interventional radiology (Ankara, Turkey)·2026

    Association of Serum Homocysteine and Vitamin B12 with Different Grades of Cognitive Impairment in Alzheimer's Disease Patients.

    Annals of African medicine·2026

    AI-Driven Atrial Fibrillation Management: From Signal to Strategy.

    Balkan medical journal·2026

    Analysis of End-Tidal CO2 Variability During Plateau Waves Episodes: An Information Theoretic Approach.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    AI and Tomosynthesis for Breast Cancer Molecular Subtyping: A step toward precision medicine.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    Towards Sustainable Protein Recovery from Biological Waste: Assessing Polyethersulfone-based Microfiltration.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    Analysis of the cardiovascular response to standardized polymicrobial peritonitis experimental model.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    Automated Wrist Ultrasound Image Bone Enhancement and Segmentation Using Deep Learning.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    A Deep Learning approach for Depressive Symptoms assessment in Parkinson's disease patients using facial videos.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2025

    Resolution and Robustness Bounds for Reconstructive Spectrometers.

    Physical review letters·2026

    Auditory cues in automated driving: enhancing takeover performance with spatialized looming warnings.

    Accident; analysis and prevention·2026

    Experimental validation of computational sub-aperture fusion wavefront sensing technology.

    Optics letters·2026

    Development and evaluation of pk-Ctone: A computationally efficient strategy for enhanced Mandarin tone perception in cochlear implants.

    The Journal of the Acoustical Society of America·2026

    Parameter Estimation of Non-Cooperative Composite Signals Based on Joint Time-Polarization Domain Separation.

    Sensors (Basel, Switzerland)·2026

    TGLDA: Tail-Guided Low-Density Normal Data Augmentation for Industrial Control Systems.

    Sensors (Basel, Switzerland)·2026
    See all related articles
    JoVE
    x logofacebook logolinkedin logoyoutube logo
    ABOUT JoVE
    OverviewLeadershipBlogJoVE Help Center
    AUTHORS
    Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
    LIBRARIANS
    TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
    RESEARCH
    JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
    EDUCATION
    JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
    Terms & Conditions of Use
    Privacy Policy
    Policies
    Jove
    Visualize
    Contact Us