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Engineering Genome-Free Bacterial Cells for Effective SARS-COV-2 Neutralisation
Yutong Yin1, Chang Liu2,3, Xianglin Ji4
1Department of Engineering Science, University of Oxford, Oxford, UK.
Microbial Biotechnology
|March 5, 2025
Summary
This study presents SimCells, novel nanobody-displaying bacteria, for effective SARS-CoV-2 neutralization. These SimCells neutralize live SARS-CoV-2 virus and variants, offering a promising strategy for viral infection treatment and prevention.
Area of Science:
- Virology
- Biotechnology
- Microbiology
Background:
- The COVID-19 pandemic necessitates innovative interventions for current challenges and future preparedness.
- The SARS-CoV-2 virus spike protein's receptor-binding domain (RBD) is crucial for viral entry and a key target for neutralization.
Purpose of the Study:
- To develop and evaluate a novel virus neutralization platform using engineered SimCells and mini-SimCells.
- To assess the efficacy of nanobody-displaying SimCells against SARS-CoV-2 and its variants.
Main Methods:
- Engineered SimCells and mini-SimCells (LPS-free Escherichia coli) to display nanobodies targeting the SARS-CoV-2 RBD.
- Utilized competitive enzyme-linked immunosorbent assay (ELISA) to measure RBD blocking efficiency.
- Performed live virus neutralization assays using SARS-CoV-2 variants and Vero cells.
Main Results:
- Nanobody-expressing SimCells achieved over 90% blocking efficiency against synthesized RBD from Wuhan and Beta variants.
- Mini-SimCells effectively neutralized live SARS-CoV-2 Victoria and Beta variants with low IC50 values.
- Mini-SimCells demonstrated protective effects on Vero cells against SARS-CoV-2 infection.
Conclusions:
- SimCell-based neutralization is a promising strategy for preventing and treating SARS-CoV-2 infections.
- This platform holds potential for addressing other viral infections.
- Engineered SimCells offer a novel approach to antiviral interventions.

