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Updated: May 24, 2025

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Single-Molecule Fluorescence Visualization of DNA Polymerase Dynamics at G-Quadruplexes
Published on: April 4, 2025
312
G-quadruplex-stalled eukaryotic replisome structure reveals helical inchworm DNA translocation.
Sahil Batra1, Benjamin Allwein2,3, Charanya Kumar1
1Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Summary
DNA G-quadruplexes (G4s) stall DNA replication by lodging within the CMG helicase, halting replisomes. This reveals an inchworm mechanism for DNA translocation and genome stability.
Area of Science:
- Molecular Biology
- Genetics
- Structural Biology
Background:
- DNA G-quadruplexes (G4s) are non-B DNA structures.
- G4s impede DNA replication, threatening genome stability.
Purpose of the Study:
- To elucidate the mechanism by which G4s cause replication fork arrest.
- To characterize G4-replisome interactions.
Main Methods:
- Reconstituted yeast and human replisomes were used to study fork collisions with G4s.
- Cryo-electron microscopy (Cryo-EM) determined the structures of stalled CMG complexes.
Main Results:
- A single G4 in the leading strand template arrests replisomes by stalling the CMG helicase.
- Cryo-EM structures show G4s lodged in the CMG central channel, blocking translocation.
- G4s stabilize CMG at specific intermediates, suggesting a helical inchworm translocation mechanism.
Conclusions:
- G4s arrest DNA replication by physically blocking the CMG helicase.
- This study reveals a novel mechanism for DNA translocation by CMG.
- Findings provide insight into eukaryotic replication fork dynamics under normal and perturbed conditions.
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