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Duplicated TLRs Possess Sub- and Neo-Functionalization to Broaden Their Ligand Recognition in Crucian Carp (Carassius
Yihui Fan1,2, Miaomiao Wu2,3, Caijiao Dai1,2
1Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan, People's Republic of China.
Abstract:
Toll-like receptors (TLRs) play a crucial role in the immune response to pathogen invasion. The TLR response patterns in teleost are significantly different from those in mammals. In this study, we systematically identified and characterized the TLR family of crucian carp (Carassius auratus). Phylogenetic analysis revealed that the CaTLR family consists of 25 members, divided into six subfamilies, and highlighted their homologous relationships with other species. mRNA expression analysis of TLRs demonstrated that most members exhibited distinct response patterns when challenged with different pathogens or pathogen ligands. Furthermore, we found that the duplicated CaTLR3 and CaTLR5 are capable of cross-sensing the dsRNA analogue poly (I: C) and bacterial flagellin, thereby activating the associated immune response. Additionally, we demonstrated that CaTLR3b, rather than CaTLR3a, functions as a homodimer to detect bacterial flagellin, and we identified the key flagellin binding site at S310 for CaTLR3b. Our findings suggest that the expansion of pathogen recognition patterns through sub- and neo-functionalization of duplicated TLR genes represents an evolutionary strategy for fish to effectively address various pathogens in aquatic environments.
Insights
Crucian carp Toll-like receptors (TLRs) show unique immune responses. Gene duplication and new functions in TLR3 and TLR5 help fish detect diverse pathogens, enhancing aquatic immune defense.
Area of Science:
- Immunology
- Genomics
- Evolutionary Biology
Background:
- Toll-like receptors (TLRs) are vital for innate immunity, recognizing pathogen-associated molecular patterns.
- Teleost fish exhibit distinct TLR expression and function compared to mammals.
- Understanding fish TLRs is crucial for aquaculture and aquatic ecosystem health.
Purpose of the Study:
- To identify and characterize the Toll-like receptor (TLR) gene family in crucian carp (Carassius auratus).
- To investigate the expression patterns and functional roles of crucian carp TLRs in immune response.
- To explore the evolutionary adaptations of TLRs in fish immunity.
Main Methods:
- Phylogenetic analysis to determine TLR family structure and relationships.
- mRNA expression profiling to assess TLR responses to pathogens and ligands.
- Functional assays to study the sensing capabilities and dimerization of specific TLRs (CaTLR3, CaTLR5).
Main Results:
- The crucian carp TLR family comprises 25 members across six subfamilies.
- Most TLRs displayed varied expression patterns upon challenge with different pathogens or ligands.
- Duplicated CaTLR3 and CaTLR5 exhibited cross-sensing of poly (I:C) and flagellin, activating immune responses.
- CaTLR3b, not CaTLR3a, homodimerizes to detect flagellin, with S310 identified as a key binding site.
Conclusions:
- The expansion and functional diversification of TLR genes in crucian carp enhance pathogen recognition capabilities.
- Sub- and neo-functionalization of duplicated TLRs represent an evolutionary strategy for fish immunity in aquatic environments.
- These findings provide insights into the molecular mechanisms of fish immune defense against diverse pathogens.
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