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Mechanistic models are utilized in individual analysis using single-source data, but imperfections arise due to data collection errors, preventing perfect prediction of observed data. The mathematical equation involves known values (Xi), observed concentrations (Ci), measurement errors (εi), model parameters (ϕj), and the related function (ƒi) for i number of values. Different least-squares metrics quantify differences between predicted and observed values. The ordinary least...
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Bayesian inference informed by parameter subset selection for a minimal PBPK brain model.

Kamala Dadashova1, Ralph C Smith1, Mansoor A Haider1

  • 1Department of Mathematics, North Carolina State University, Raleigh, NC 27695, USA.

Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences
|March 13, 2025
PubMed
Summary
This summary is machine-generated.

Physiologically based pharmacokinetic (PBPK) models require parameter uncertainty quantification. This study integrates parameter identifiability analysis with Bayesian inference to refine models, quantify uncertainties, and improve predictions.

Keywords:
Bayesian inferenceparameter identifiabilityparameter subset selectionphysiologically based pharmacokinetic modelling

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Area of Science:

  • Pharmacokinetics and Systems Biology
  • Computational Biology
  • Mathematical Modeling

Background:

  • Physiologically based pharmacokinetic (PBPK) models simulate drug absorption, distribution, metabolism, and excretion (ADME) using ordinary differential equations.
  • These complex models require accurate parameter quantification and uncertainty analysis for reliable clinical application.
  • Parameter identifiability, determining which parameters are uniquely defined by data, is crucial for robust PBPK modeling.

Purpose of the Study:

  • To develop and validate a strategy for integrating parameter subset selection with Bayesian inference in PBPK models.
  • To enhance the accuracy of PBPK model predictions through refined parameter estimation and uncertainty quantification.
  • To reduce the computational cost associated with complex PBPK model analyses.

Main Methods:

  • Implementing a strategy that combines parameter identifiability analysis with Bayesian inference.
  • Utilizing frequentist or Bayesian inference methods for uncertainty quantification.
  • Applying parameter subset selection to refine the set of identifiable parameters within PBPK models.

Main Results:

  • Successful integration of parameter identifiability analysis and Bayesian inference for PBPK models.
  • Demonstrated refinement of identifiable parameter subsets, leading to improved model predictions.
  • Quantification of both parameter and response uncertainties, enhancing model reliability.
  • Reduction in computational demands for PBPK model analysis.

Conclusions:

  • The proposed strategy effectively refines PBPK models by focusing on identifiable parameters.
  • Integrating identifiability analysis with Bayesian inference enhances prediction accuracy and quantifies uncertainty.
  • This approach offers a computationally efficient method for robust PBPK model development and application in healthcare.