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Published on: June 18, 2021
ARCHER. A new algorithm for automatic removal of cosmic spikes and saturated pixels in hyperspectral Raman
Enmanuel Cruz Muñoz1, Davide Ballabio1, José Manuel Amigo2
1Department of Earth and Environmental Sciences - DISAT, University of Milano-Bicocca, Piazza della Scienza 1, 20126 Milano, Italy.
We developed ARCHER, a new algorithm for cosmic spike removal in hyperspectral Raman imaging. ARCHER effectively detects and removes cosmic spikes and saturated pixels, improving data preprocessing.
Area of Science:
- Spectroscopy
- Data Science
- Imaging
Background:
- Cosmic spikes are a significant challenge in Raman spectroscopy preprocessing.
- Existing software methods for cosmic spike removal are often ineffective or poorly documented.
- Accurate preprocessing is crucial for reliable multivariate analysis of hyperspectral Raman data.
Purpose of the Study:
- To introduce ARCHER, a novel algorithm for automatic cosmic spike correction in Hyperspectral Raman Imaging.
- To enable effective detection and removal of both cosmic spikes and saturated pixels.
- To optimize algorithm parameters for enhanced performance.
Main Methods:
- ARCHER combines multiple steps and factorizations for robust cosmic spike detection.
- The algorithm incorporates saturated pixel detection.
- Parameter optimization was performed using D-optimal design, validated on artificial and real hyperspectral images.
Main Results:
- ARCHER demonstrates effective and automatic detection and removal of cosmic spikes.
- The algorithm successfully identifies saturated pixels, essential for subsequent analysis.
- Validation across various complexity levels confirmed algorithm robustness.
Conclusions:
- ARCHER provides an effective solution for cosmic spike and saturated pixel removal in Hyperspectral Raman Imaging.
- The algorithm enhances the preprocessing pipeline for Raman spectroscopy data.
- This tool improves the reliability of downstream multivariate analyses.
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