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Radical Reactivity: Overview01:11

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Radicals, the highly reactive species, gain stability by undergoing three different reactions. The first reaction involves a radical-radical coupling, in which a radical combines with another radical, forming a spin‐paired molecule. The second reaction is between a radical and a spin‐paired molecule, generating a new radical and a new spin‐paired molecule. The third reaction is radical decomposition in a unimolecular reaction, forming a new radical and a spin‐paired...
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Radicals adjacent to electron‐withdrawing groups are called electrophilic radicals. These radicals readily react with nucleophilic alkenes. For example, the malonate radical, in which the radical center is flanked by two electron‐withdrawing groups, reacts readily with butyl vinyl ether, which consists of an electron‐donating oxygen substituent. The reaction between electrophilic malonate radical and nucleophilic vinyl ether is favored because the radical has a...
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Radical Reactivity: Nucleophilic Radicals01:16

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Radicals adjacent to electron-donating groups are called nucleophilic radicals. These radicals readily react with electrophilic alkenes. The SOMO–LUMO interactions are the driving force for the reaction, where the high-energy SOMO of the electron-rich, nucleophilic radicals interacts with the low-energy LUMO of the electron-deficient, electrophilic alkenes. Such SOMO–LUMO interactions are the basis of reactive radical traps, affecting the selectivity in radical reactions. For...
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Radicals: Electronic Structure and Geometry01:07

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This lesson delves into the geometry of a radical, which is influenced by the electronic structure of the molecule. The principle is similar to that of a lone pair, where the unpaired electron influences the geometry at the radical center.
Accordingly, the structure of a trivalent radical lies between the geometries of carbocations and carbanions. An sp2-hybridized carbocation is trigonal planar, while an sp3-hybridized carbanion is trigonal pyramidal. Here, the difference in geometry is...
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Radical Formation: Overview01:03

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A bond can be broken either by heterolytic bond cleavage to form ions or homolytic bond cleavage to yield radicals. A fishhook arrow is used to represent the motion of a single electron in homolytic bond cleavage. There are two main sources from which radicals can be formed:
Radicals from spin-paired molecules:
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Radical Formation: Elimination00:51

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Another method of radical formation is the elimination process. It is the opposite of the addition route and is driven by the instability of the radical. For example, as depicted in Figure 1, dibenzoyl peroxide yields a pair of unstable radicals upon homolysis. Given its instability, this radical spontaneously undergoes elimination via a C–C bond cleavage to form a relatively more stable phenyl radical. The mechanism involves cleavage of the bond between the α and β positions...
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Machine Learning Approaches for Developing Potential Surfaces: Applications to OH-(H2O) (n = 1-3) Complexes.

Greta M Jacobson1, Lixue Cheng2,3, Vignesh C Bhethanabotla2

  • 1Department of Chemistry, University of Washington, Seattle, Washington 98195, United States.

The Journal of Physical Chemistry. A
|March 19, 2025
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Summary
This summary is machine-generated.

This study introduces a machine learning approach to create accurate potential energy surfaces for molecular systems. The method combines molecular orbital learning with neural networks, enabling more efficient and reliable simulations of ions like hydroxide and hydronium with water molecules.

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Area of Science:

  • Computational Chemistry
  • Quantum Mechanics
  • Machine Learning in Chemistry

Background:

  • Accurate potential energy surfaces are crucial for understanding molecular behavior.
  • Traditional methods for calculating these surfaces are computationally expensive.
  • Machine learning offers a promising avenue for accelerating these calculations.

Purpose of the Study:

  • To develop a novel, two-step machine learning approach for high-level *ab initio* potential surface generation.
  • To expand the molecular-orbital based machine learning (MOB-ML) model for learning correlation energies at the complete basis set limit.
  • To create accurate neural network potentials for systems like hydroxide and hydronium ions interacting with water molecules.

Main Methods:

  • Utilized Gaussian process regression within the MOB-ML model to learn correlation energies.
  • Employed smaller basis set orbitals (aug-cc-pVDZ) as features for predicting complete basis set limit energies.
  • Integrated MOB-ML with neural network potentials, using diffusion Monte Carlo (DMC) sampled geometries and energies for training.
  • Developed protocols to optimize the use of DMC-generated structures in the training process.

Main Results:

  • Successfully developed and applied MOB-ML combined with neural networks to generate potential surfaces for OH⁻(H₂O) and H₃O⁺(H₂O).
  • DMC calculations using the new potentials showed good agreement with previous results for these floppy molecular systems.
  • Generated novel potential surfaces for larger systems: OH⁻(H₂O)₂ , OH⁻(H₂O)₃, H₃O⁺(H₂O)₂, and H₃O⁺(H₂O)₃.
  • Found similar proton delocalization levels between hydroxide and hydronium ions bound to the same number of water molecules.

Conclusions:

  • The combined MOB-ML and neural network approach provides an efficient route to high-accuracy potential surfaces.
  • The developed potentials enable reliable simulations of hydrated proton and hydroxide systems.
  • The study highlights similarities in proton delocalization for hydroxide and hydronium systems, consistent with experimental spectral observations.