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Dual-modality SEM-Raman smart scanning for fast hyperspectral Raman micro-imaging - application to bones
Valentin Gilet1, Guillaume Mabilleau2, Matthieu Loumaigne3
1Université d'Angers, LARIS, UMR IRHS INRAe, 49000 Angers, France.
Biomedical Optics Express
|March 20, 2025
Summary
We optimized Raman micro-imaging by replacing a slow low-SNR scan with faster scanning electron microscopy (SEM). This smart scanning technique significantly reduces acquisition time for biomedical data, preserving crucial information.
Area of Science:
- Spectroscopy and Imaging
- Materials Science
- Biomedical Engineering
Background:
- Raman micro-imaging offers detailed chemical information but suffers from long acquisition times.
- Smart scanning techniques aim to reduce acquisition time by focusing on essential data.
- Previous protocols combined spectral and spatial compression, with a low-SNR initial scan as a bottleneck.
Purpose of the Study:
- To accelerate Raman micro-imaging by optimizing a previously proposed smart scanning protocol.
- To replace the time-consuming low-signal-to-noise ratio (SNR) initial scan with a faster imaging modality.
- To evaluate the impact of this modification on data quality and clinical relevance.
Main Methods:
- Replaced the initial low-SNR Raman scan with scanning electron microscopy (SEM) in a two-pass imaging protocol.
- Acquired and analyzed biomedical data (bone samples) using the modified protocol.
- Correlated SEM data with Raman spectral information.
Main Results:
- The new protocol achieved a three-fold reduction in acquisition time compared to the original method.
- Reconstructed Raman spectra exhibited limited distortion.
- The clinical value of extracted information from bone samples was preserved.
Conclusions:
- Replacing the initial low-SNR scan with SEM is an effective strategy to accelerate Raman micro-imaging.
- This optimized protocol maintains data integrity and clinical relevance.
- The method shows potential for accelerating other slow spectral imaging techniques.

