Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Neural Circuits01:25

Neural Circuits

952
Neural circuits and neuronal pools are two of the main structures found in the nervous system. Neural circuits are networks of neurons that work together to carry out a specific task or process. They consist of interconnected neurons and glial cells, which provide structural and metabolic support.
Neuronal pools are collections of nerve cells with similar functions and interact through chemical and electrical signals. These pools include both interneurons (the central neural circuit nodes that...
952
Circuit Terminology01:14

Circuit Terminology

571
An electrical network is a system composed of interconnected elements, such as resistors, capacitors, inductors, and voltage or current sources. Unlike a circuit, an electrical network does not necessarily form a closed path. In other words, while all circuits can be considered networks due to their interconnected nature, not every network qualifies as a circuit.
A circuit, on the other hand, is also an interconnected system of electrical elements but must contain one or more closed paths.
571
Neuroplasticity01:01

Neuroplasticity

255
Neuroplasticity reflects the brain's remarkable capacity to adapt and evolve, responding dynamically to learning, experiences, or injury by reorganizing its neural circuitry. This reorganization involves creating new neural connections and refining old ones through a series of biological processes that contribute to the brain's lifelong development and adaptability.
255
Neuron Structure01:31

Neuron Structure

218.4K
Overview
218.4K
Neuronal Communication01:28

Neuronal Communication

727
Neurons, the fundamental units of the brain and nervous system, communicate through complex electrochemical signals that underpin all cognitive and bodily functions. This communication is primarily facilitated by a process involving the generation and propagation of an action potential along the axon of the neuron. When the internal electrical charge of a neuron surpasses a certain threshold, an action potential is triggered. This rapid change in voltage travels swiftly along the axon to the...
727
Electrical Synapses01:28

Electrical Synapses

8.1K
Electrical synapses found in all nervous systems play important and unique roles. In these synapses, the presynaptic and postsynaptic membranes are very close together (3.5 nm) and are actually physically connected by channel proteins forming gap junctions.
Gap junctions allow the current to pass directly from one cell to the next. In contrast, in the chemical synapse, the neurotransmitters carry the information through the synaptic cleft from one neuron to the next. They consist of two...
8.1K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

[The application status, challenges and prospects of artificial intelligence in communicable diseases prevention and control of health facilities in China].

Zhonghua yu fang yi xue za zhi [Chinese journal of preventive medicine]·2025
Same author

[Evaluation of the short-term prognosis of patients with HBV-related acute-on-chronic liver failure by combining ferritin with COSSH-ACLF II score].

Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology·2025
Same author

[Application value of an aMAP score in predicting the occurrence of hepatocellular carcinoma in patients with chronic hepatitis B receiving antiviral therapy].

Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology·2025
Same author

[Risk prediction model of hepatitis B associated hepatocellular carcinoma].

Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology·2024
Same author

[A case of Castleman's disease misdiagnosed as cirrhosis].

Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology·2024
Same author

[Investigate of the etiology and prevention status of liver cirrhosis].

Zhonghua yi xue za zhi·2023
Same journal

Causal intervention validation of gene regulatory signals in scGPT.

Journal of biomedical informatics·2026
Same journal

CoAff-DTI: Fine-grained drug-target interaction prediction using pre-trained language models and affinity-guided mechanisms.

Journal of biomedical informatics·2026
Same journal

Evaluation of temporal preservation in synthetic longitudinal patient data.

Journal of biomedical informatics·2026
Same journal

ARKE: An ontology-driven framework for automated mapping of local radiology procedure terms to the LOINC-RadLex playbook using large language model.

Journal of biomedical informatics·2026
Same journal

A validation-driven training controller for cross-lingual biomedical NER via reinforcement learning-based adaptive loss weighting.

Journal of biomedical informatics·2026
Same journal

ASP-HR: An Adaptive Spatial Perception and Hierarchical Reasoning mechanism for document-level biomedical relation extraction.

Journal of biomedical informatics·2026
See all related articles

Related Experiment Video

Updated: May 20, 2025

Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

966

A graph neural network explainability strategy driven by key subgraph connectivity.

L N Dai1, D H Xu2, Y F Gao3

  • 1Zhejiang Financial College, Xueyuan Street 118, Qiantang District, 310018 Hangzhou, Zhejiang Province, China.

Journal of Biomedical Informatics
|March 23, 2025
PubMed
Summary
This summary is machine-generated.

This study introduces a novel subgraph retrieval method for Graph Neural Networks (GNNs), improving explainability by focusing on key subgraphs rather than individual nodes or edges. The approach enhances decision-making transparency in complex graph analysis tasks.

Keywords:
Explainability strategyGraph neural networksKey subgraph retrievalpolaritonMolecular interpretabilitySubgraph connectivity

More Related Videos

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms
08:51

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms

Published on: November 1, 2019

5.6K
Revealing Neural Circuit Topography in Multi-Color
09:11

Revealing Neural Circuit Topography in Multi-Color

Published on: November 14, 2011

14.9K

Related Experiment Videos

Last Updated: May 20, 2025

Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

966
Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms
08:51

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms

Published on: November 1, 2019

5.6K
Revealing Neural Circuit Topography in Multi-Color
09:11

Revealing Neural Circuit Topography in Multi-Color

Published on: November 14, 2011

14.9K

Area of Science:

  • Graph Neural Networks (GNNs)
  • Machine Learning Explainability
  • Subgraph Analysis

Background:

  • Current GNN explainability methods often overlook critical subgraphs, leading to fragmented insights.
  • This limitation hinders reliable explanations for complex GNN decision-making processes.

Purpose of the Study:

  • To propose and evaluate a novel key subgraph retrieval method for GNN explainability.
  • To enhance the reliability and focus of GNN decision-making interpretations.

Main Methods:

  • Utilized Euclidean distance for key subgraph retrieval.
  • Employed node representations from GNNs trained on BA3 and Mutagenicity datasets.
  • Conducted comparative performance experiments and visualization analyses.

Main Results:

  • Achieved high accuracy rates: 99.25% on BA3 and 82.40% on Mutagenicity datasets.
  • Demonstrated superior effectiveness and robustness compared to existing explainability strategies.
  • Visualizations confirmed the method's ability to identify significant explanatory subgraphs.

Conclusions:

  • The proposed key subgraph retrieval method offers a more effective approach to GNN explainability.
  • Focusing on subgraphs provides more coherent and reliable insights into GNN decisions.
  • This technique advances the interpretability of complex graph-based machine learning models.