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Updated: May 20, 2025

Detection of Cell-Free DNA in Blood Plasma Samples of Cancer Patients
Published on: September 9, 2020
Routine Clinical Liquid Biopsy Testing for Solid Tumors Delivers the Promise of Minimally Invasive Detection of
Peng Wang1, Richard Kenneth Yang1, Fatima Zahra Jelloul1
1Division of Pathology and Laboratory Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX.
Purpose:
A 70-gene liquid biopsy (LB) panel (LBP-70) was implemented at our institution to identify genetic alterations in the plasma of patients with solid tumors. We report the clinical utility of LBP-70 in a retrospective study of 1,243 consecutively tested patients.
Materials And Methods:
Electronic medical records were reviewed for relevant clinicopathologic and radiologic information and preanalytical variables, including circulating cell-free DNA yield. The clinical utility of the LBP-70 assay was evaluated on the basis of its ability to identify major tumor drivers and/or targetable alterations and the concordance of the LBP-70 results with tissue genotyping and radiologic findings.
Results:
Positive LB findings were reported in 75% of patients, ranging from 67% to 85% among various tumor types and 60% to 77% in different tumor stages within an average of seven workdays. The mutant allele frequency (AF) ranged from 0.1% to 90%, and 50% of the variants were detected at AF <2%. Overall, LBP-70 provided clinically informative findings in 87% of the patients. In patients with non-small cell lung cancer (NSCLC) and colorectal cancer without tissue specimens, LBP-70 identified informative findings in 74% of patients, including EGFR exon 18-21 mutations in 22% of patients with NSCLC and RAS and/or BRAF V600E mutations in 44% of patients with colorectal cancer. LBP-70 results showed 62% concordance with tissue genotyping and 79% concordance with radiologic findings.
Conclusion:
The results of this study demonstrated the clinical utility of LBP-70 in identifying clinically informative findings. LBP-70 is an alternative to tissue-based tumor genotyping and provides a more rapid method for detecting actionable genetic alterations.
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