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Updated: May 20, 2025

Measurement of Microtubule Dynamics by Spinning Disk Microscopy in Monopolar Mitotic Spindles
Published on: November 15, 2019
Microtubules as a versatile reference standard for expansion microscopy
Rajdeep Chowdhury1,2, Tiago Mimoso3, Abed Alrahman Chouaib4
1Department of Neuro- and Sensory Physiology, University Medical Center Göttingen, Göttingen, Germany.
Abstract:
Expansion microscopy (ExM) is continually improving, and new ExM variants need to be validated on well-defined biological structures. There is no consensus on validation structures for ExM, especially as nuclear pore complexes or DNA nanorulers are not popular for ExM studies. Here we propose that microtubules should be used for ExM validation. The diameter of microtubules immunostained using primary and secondary antibodies is sufficiently large for the validation of techniques with resolutions better than 50 nm. For techniques with higher precision (up to ~10 nm), microtubules can be assembled and imaged in vitro, using a protocol that we introduce here. Alternatively, a cellular extraction procedure can be employed, followed by labeling the peptide chains of the tubulin molecules with NHS-ester fluorophores. Finally, for nanometer-scale techniques, single tubulin molecules can be analyzed. We conclude that microtubules are valuable structures for the validation of ExM and related technologies.
Insights
Microtubules are proposed as ideal structures for validating expansion microscopy (ExM) techniques. This study details methods for using microtubules at various scales to assess ExM resolution and precision.
Area of Science:
- Biotechnology
- Microscopy
- Cell Biology
Background:
- Expansion microscopy (ExM) is advancing, requiring standardized validation methods.
- Current ExM validation structures lack consensus, hindering technique development.
Purpose of the Study:
- To propose and validate microtubules as a universal standard for ExM validation.
- To establish protocols for using microtubules across different ExM resolution scales.
Main Methods:
- Immunostaining of cellular microtubules for validation of techniques with <50 nm resolution.
- In vitro assembly and imaging of microtubules for validation of techniques with ~10 nm resolution.
- Labeling tubulin peptide chains and analyzing single tubulin molecules for nanometer-scale techniques.
Main Results:
- Microtubule diameter is suitable for validating ExM resolutions.
- Protocols for in vitro microtubule assembly and cellular extraction are presented.
- Multiple methods demonstrate microtubule utility for ExM validation.
Conclusions:
- Microtubules offer a versatile and reliable structure for ExM validation.
- The proposed methods support the standardization of ExM technology assessment.
- Microtubules are valuable for validating ExM and related super-resolution imaging technologies.
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