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Structures of HCoV-OC43 HR1 Domain in Complex with Cognate HR2 or Analogue EK1 Peptide
Xiuxiu He1,2,3, Huanzhen Liu2, Guang Yang1,2,3
1School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing 210023, China.
Insights
Researchers elucidated the structure of the human coronavirus OC43 (HCoV-OC43) spike (S) protein
Area of Science:
- Structural Biology
- Virology
- Molecular Biology
Background:
- Human coronavirus OC43 (HCoV-OC43) causes common colds and severe illness in vulnerable populations.
- The spike (S) glycoprotein of HCoV-OC43 mediates host-cell attachment and membrane fusion.
Purpose of the Study:
- To determine the molecular mechanism of HCoV-OC43 membrane fusion.
- To understand the structural basis for HCoV-OC43 S protein function.
Main Methods:
- Crystal structure determination of the HCoV-OC43 S protein post-fusion core at 3.34 Å resolution.
- Crystal structure determination of the HCoV-OC43 HR1P and fusion inhibitor EK1 complex at 2.71 Å resolution.
Main Results:
- The post-fusion structure reveals a parallel trimeric coiled coil of HR1 helices with entwined HR2 helices.
- The fusion inhibitor EK1, derived from HR2P, maintains key interactions within the fusion core, stabilizing its conformation.
- Structural insights explain the mechanism of HCoV-OC43 S protein-mediated membrane fusion.
Conclusions:
- The study reveals critical intrahelical and interhelical interactions in HCoV-OC43 S protein fusion.
- Findings provide a mechanistic understanding of HCoV-OC43 inhibition by HR2 mimic peptides like EK1.
Abstract:
Human coronavirus OC43 (HCoV-OC43) is usually associated with common colds, but also related to severe disease in the frail. Its envelope glycoproteins spike (S) is responsible for host-cell attachment and membrane fusion. To understand the molecular basis of membrane fusion of HCoV-OC43, we solved the 3.34 Å crystal structure of the post-fusion state formed by two heptad repeat domains (HR1P and HR2P) of OC43-S. This fusion core comprises a parallel trimeric coiled coil of three HR1 helices with 61 Å at length, around which three HR2 helices are entwined in an antiparallel manner, as anticipated. Moreover, a pan-CoV fusion inhibitor EK1 derived from OC43-HR2P was also crystalized with OC43-HR1P in the resolution of 2.71 Å. Parallel comparisons rationalize the design of EK1, maintaining various hydrophobic and charged or hydrophilic interactions formed in the initial fusion core to stabilize the overall conformation. Together, our results not only reveal the critical intrahelical and interhelical interactions underlying the mechanism of action of OC43-S fusion, but also help our understanding on the mechanism of HCoV-OC43 inhibition by analogue HR2 mimic peptide.
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