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Updated: May 6, 2026

Monitoring Activation of the Antiviral Pattern Recognition Receptors RIG-I And PKR By Limited Protease Digestion and Native PAGE
Published on: July 29, 2014
The USP43/RNF2 axis negatively regulates antiviral innate immunity by promoting TBK1 ubiquitination and degradation
Xibao Zhao1, Qianqian Di1, Jin Chen1
1Guangdong Provincial Key Laboratory of Regional Immunity and Diseases, Marshall Laboratory of Biomedical Engineering, Institute of Biological Therapy, Shenzhen University Medical School, Shenzhen University, Shenzhen, China.
Abstract:
The E3 ubiquitin ligase usually regulates the substrate proteins ubiquitination and degradation, but the study of itself post-translational modification and stability is still elusive. Here, we reveal that E3 ubiquitin ligase ring finger protein 2 (RNF2) is deubiquitinated and stabilized by ubiquitin specific peptidase 43 (USP43) through interactome and quantitative ubiquitinome mass spectrometry analysis. This study demonstrated that USP43, as a deubiquitinating enzyme, negatively regulates the expression of type I interferon (IFN) and the Usp43 deficient enhances antiviral innate immune response against VSV infection both in vitro and in vivo. Mechanistically, USP43 negatively regulates antiviral immunity by promoting RNF2-mediated TBK1 ubiquitination and degradation. USP43 stabilizes RNF2 by removing K48-linked ubiquitination of RNF2 at Lys239 and Lys249, while RNF2 promotes TBK1 degradation by increasing K48-linked ubiquitination of TBK1 at Lys670. These findings uncover the E3 ubiquitin ligase RNF2 post-translational ubiquitination modification and stability regulation, and reveals a novel mechanism that the USP43/RNF2 axis in regulating antiviral innate immunity.
Insights
Ubiquitin specific peptidase 43 (USP43) stabilizes ring finger protein 2 (RNF2), enhancing antiviral immunity by regulating TBK1 degradation. This reveals a novel USP43/RNF2 pathway in innate immune response.
Area of Science:
- Cellular Biology
- Immunology
- Biochemistry
Background:
- E3 ubiquitin ligases control protein degradation, but their own regulation is unclear.
- Understanding E3 ligase stability is crucial for cellular processes and disease.
Purpose of the Study:
- To investigate the post-translational modification and stability of the E3 ubiquitin ligase RNF2.
- To elucidate the role of USP43 in regulating RNF2 and its impact on antiviral immunity.
Main Methods:
- Interactome and quantitative ubiquitinome mass spectrometry.
- In vitro and in vivo studies using VSV infection models.
- Analysis of ubiquitination and protein degradation pathways.
Main Results:
- USP43 deubiquitinates and stabilizes RNF2 by removing K48-linked ubiquitination.
- USP43 negatively regulates type I interferon expression, enhancing antiviral immunity in USP43-deficient cells.
- RNF2 promotes TBK1 degradation via K48-linked ubiquitination, a process influenced by USP43.
Conclusions:
- USP43 stabilizes RNF2, revealing a novel mechanism for E3 ligase stability.
- The USP43/RNF2 axis plays a critical role in regulating antiviral innate immunity.
- This pathway offers potential targets for modulating immune responses.
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