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A Phenotyping Regimen for Genetically Modified Mice Used to Study Genes Implicated in Human Diseases of Aging
Published on: July 14, 2016
Evidence for Genetic Causal Association Between the Gut Microbiome, Derived Metabolites, and Age-Related Macular
Pinghui Wei1,2,3, Shan Gao1,4, Guoge Han1,2,3
1Tianjin Eye Hospital, Tianjin Key Lab of Ophthalmology and Visual Science, Tianjin 300020, China.
Abstract:
Background/Objectives: Despite substantial research, the causal relationships between gut microbiota (GM) and age-related macular degeneration (AMD) remain unclear. We aimed to explore these causal associations using Mendelian randomization (MR) and elucidate the potential mechanisms mediated by blood metabolites. Methods: We utilized the 211 GM dataset (n = 18,340) provided by the MiBioGen consortium. AMD outcome data were sourced from the MRC Integrated Epidemiology Unit (IEU) OpenGWAS Project. We performed bidirectional MR, two mediation analyses, and two-step MR to assess the causal links between GM and different stages of AMD (early, dry, and wet). Results: Our findings indicate that the Bacteroidales S24.7 group and genus Dorea are associated with an increased risk of early AMD, while Ruminococcaceae UCG011 and Parasutterella are linked to a higher risk of dry AMD. Conversely, Lachnospiraceae UCG004 and Anaerotruncus are protective against dry AMD. In the case of wet AMD, Intestinimonas and Sellimonas increase risk, whereas Anaerotruncus and Rikenellaceae RC9 reduce it. Additionally, various blood metabolites were implicated: valine, arabinose, creatine, lysine, alanine, and apolipoprotein A1 were associated with early AMD; glutamine and hyodeoxycholate-with a reduced risk of dry AMD; and androsterone sulfate, epiandrosterone sulfate, and lipopolysaccharide-with a reduced risk of wet AMD. Notably, the association between family Oxalobacteraceae and early AMD was mediated by valine, accounting for 19.1% of the association. Conclusions: This study establishes causal links between specific gut microbiota and AMD, mediated by blood metabolites, thereby enhancing our understanding of the gut-retina axis in AMD pathophysiology.
Insights
This study reveals causal links between specific gut bacteria and age-related macular degeneration (AMD). Blood metabolites mediate these gut microbiota-AMD connections, offering new insights into the gut-retina axis.
Area of Science:
- Ophthalmology
- Microbiology
- Genetics
Background:
- Causal relationships between gut microbiota (GM) and age-related macular degeneration (AMD) remain unclear despite extensive research.
- Understanding these links is crucial for developing novel therapeutic strategies for AMD.
Purpose of the Study:
- To explore causal associations between GM and AMD using Mendelian randomization (MR).
- To identify blood metabolites mediating these GM-AMD relationships.
- To investigate links across different stages of AMD: early, dry, and wet.
Main Methods:
- Utilized a large GM dataset (n=18,340) from the MiBioGen consortium.
- Sourced AMD outcome data from the MRC IEU OpenGWAS Project.
- Employed bidirectional MR, mediation, and two-step MR analyses.
Main Results:
- Identified specific GM taxa associated with increased or decreased risk for early, dry, and wet AMD.
- Linked several blood metabolites (e.g., valine, creatine, glutamine) to AMD risk.
- Demonstrated valine as a mediator between Oxalobacteraceae and early AMD.
Conclusions:
- Established causal links between specific gut microbiota and AMD stages.
- Highlighted the mediating role of blood metabolites in the gut-retina axis.
- Advanced understanding of AMD pathophysiology through the lens of the gut microbiome.
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